Protein–RNA interactions for Protein: P02319

Prm1, Sperm protamine P1, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prm1P02319 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Prm1P02319 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC15.4■□□□□ 0.06
Prm1P02319 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Prm1P02319 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC15.37■□□□□ 0.05
Prm1P02319 Peli2-204ENSMUST00000226513 1320 ntBASIC15.36■□□□□ 0.05
Prm1P02319 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC15.35■□□□□ 0.05
Prm1P02319 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.35■□□□□ 0.05
Prm1P02319 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Prm1P02319 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Prm1P02319 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC15.32■□□□□ 0.04
Prm1P02319 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prm1P02319 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prm1P02319 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prm1P02319 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prm1P02319 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Prm1P02319 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prm1P02319 AL845457.1-201ENSMUST00000197244 68 ntBASIC15.29■□□□□ 0.04
Prm1P02319 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prm1P02319 Gm6821-201ENSMUST00000107540 542 ntBASIC15.25■□□□□ 0.03
Prm1P02319 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC15.25■□□□□ 0.03
Prm1P02319 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prm1P02319 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prm1P02319 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prm1P02319 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prm1P02319 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prm1P02319 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prm1P02319 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC15.21■□□□□ 0.03
Prm1P02319 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prm1P02319 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.21■□□□□ 0.03
Prm1P02319 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prm1P02319 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Prm1P02319 Gm24970-201ENSMUST00000175582 82 ntBASIC15.18■□□□□ 0.02
Prm1P02319 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.18■□□□□ 0.02
Prm1P02319 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prm1P02319 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prm1P02319 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prm1P02319 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Prm1P02319 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC15.16■□□□□ 0.02
Prm1P02319 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Prm1P02319 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Prm1P02319 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prm1P02319 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Prm1P02319 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Prm1P02319 Mir6538-201ENSMUST00000183713 110 ntBASIC15.13■□□□□ 0.01
Prm1P02319 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.12■□□□□ 0.01
Prm1P02319 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.12■□□□□ 0.01
Prm1P02319 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC15.11■□□□□ 0.01
Prm1P02319 Cap2-205ENSMUST00000225824 1634 ntBASIC15.08■□□□□ 0
Prm1P02319 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prm1P02319 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC15.08■□□□□ 0
Prm1P02319 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.07■□□□□ 0
Prm1P02319 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC15.05■□□□□ -0
Prm1P02319 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.05■□□□□ -0
Prm1P02319 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Prm1P02319 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
Prm1P02319 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Prm1P02319 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prm1P02319 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prm1P02319 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prm1P02319 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prm1P02319 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.99□□□□□ -0.01
Prm1P02319 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Prm1P02319 Gm11175-201ENSMUST00000116172 543 ntBASIC14.98□□□□□ -0.01
Prm1P02319 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Prm1P02319 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prm1P02319 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prm1P02319 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prm1P02319 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prm1P02319 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prm1P02319 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prm1P02319 Gm7432-201ENSMUST00000210343 879 ntBASIC14.92□□□□□ -0.02
Prm1P02319 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prm1P02319 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
Prm1P02319 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC14.9□□□□□ -0.02
Prm1P02319 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prm1P02319 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prm1P02319 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Prm1P02319 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prm1P02319 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Prm1P02319 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prm1P02319 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.87□□□□□ -0.03
Prm1P02319 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prm1P02319 Gm42809-201ENSMUST00000198429 1138 ntBASIC14.85□□□□□ -0.03
Prm1P02319 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Prm1P02319 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Prm1P02319 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Prm1P02319 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC14.84□□□□□ -0.03
Prm1P02319 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Prm1P02319 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prm1P02319 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prm1P02319 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC14.82□□□□□ -0.04
Prm1P02319 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prm1P02319 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prm1P02319 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prm1P02319 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Prm1P02319 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Prm1P02319 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prm1P02319 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Prm1P02319 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prm1P02319 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms