Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.04■■□□□ 1.92
Shoc2O88520 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Shoc2O88520 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Shoc2O88520 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Shoc2O88520 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Shoc2O88520 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.98■■□□□ 1.91
Shoc2O88520 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
Shoc2O88520 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.96■■□□□ 1.91
Shoc2O88520 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Shoc2O88520 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.92■■□□□ 1.9
Shoc2O88520 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Shoc2O88520 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Shoc2O88520 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Shoc2O88520 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Shoc2O88520 Mipep-204ENSMUST00000225043 1548 ntBASIC26.87■■□□□ 1.89
Shoc2O88520 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Shoc2O88520 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Shoc2O88520 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Shoc2O88520 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Shoc2O88520 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Shoc2O88520 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Shoc2O88520 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Shoc2O88520 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.78■■□□□ 1.88
Shoc2O88520 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Shoc2O88520 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
Shoc2O88520 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Shoc2O88520 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Shoc2O88520 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Shoc2O88520 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Shoc2O88520 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Shoc2O88520 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Shoc2O88520 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
Shoc2O88520 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Shoc2O88520 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Shoc2O88520 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Shoc2O88520 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Shoc2O88520 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.67■■□□□ 1.86
Shoc2O88520 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.66■■□□□ 1.86
Shoc2O88520 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
Shoc2O88520 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Shoc2O88520 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.62■■□□□ 1.85
Shoc2O88520 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Shoc2O88520 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
Shoc2O88520 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Shoc2O88520 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Shoc2O88520 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Shoc2O88520 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Shoc2O88520 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Shoc2O88520 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Shoc2O88520 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Shoc2O88520 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Shoc2O88520 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Shoc2O88520 Gm24804-201ENSMUST00000174982 85 ntBASIC26.53■■□□□ 1.84
Shoc2O88520 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Shoc2O88520 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Shoc2O88520 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Shoc2O88520 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
Shoc2O88520 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Shoc2O88520 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Shoc2O88520 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Shoc2O88520 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Shoc2O88520 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Shoc2O88520 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Shoc2O88520 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Shoc2O88520 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.42■■□□□ 1.82
Shoc2O88520 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Shoc2O88520 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Shoc2O88520 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Shoc2O88520 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Shoc2O88520 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Shoc2O88520 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Shoc2O88520 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
Shoc2O88520 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Shoc2O88520 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Shoc2O88520 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Shoc2O88520 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Shoc2O88520 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.35■■□□□ 1.81
Shoc2O88520 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.35■■□□□ 1.81
Shoc2O88520 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Shoc2O88520 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Shoc2O88520 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Shoc2O88520 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Shoc2O88520 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Shoc2O88520 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Shoc2O88520 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Shoc2O88520 Peli2-204ENSMUST00000226513 1320 ntBASIC26.32■■□□□ 1.8
Shoc2O88520 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Shoc2O88520 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Shoc2O88520 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Shoc2O88520 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.29■■□□□ 1.8
Shoc2O88520 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.28■■□□□ 1.8
Shoc2O88520 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Shoc2O88520 Zxda-201ENSMUST00000117281 2621 ntBASIC26.27■■□□□ 1.8
Shoc2O88520 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Shoc2O88520 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Shoc2O88520 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.25■■□□□ 1.79
Shoc2O88520 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Shoc2O88520 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Shoc2O88520 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Shoc2O88520 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms