Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Gm10139O88245 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Gm10139O88245 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Gm10139O88245 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm10139O88245 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm10139O88245 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC15.98■□□□□ 0.15
Gm10139O88245 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm10139O88245 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Gm10139O88245 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Gm10139O88245 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm10139O88245 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Gm10139O88245 Gm25262-201ENSMUST00000174934 133 ntBASIC15.94■□□□□ 0.14
Gm10139O88245 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm10139O88245 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm10139O88245 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm10139O88245 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm10139O88245 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm10139O88245 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gm10139O88245 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm10139O88245 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm10139O88245 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Gm10139O88245 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm10139O88245 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm10139O88245 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC15.84■□□□□ 0.13
Gm10139O88245 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Gm10139O88245 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gm10139O88245 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm10139O88245 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm10139O88245 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm10139O88245 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm10139O88245 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Gm10139O88245 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm10139O88245 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Gm10139O88245 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm10139O88245 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm10139O88245 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm10139O88245 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm10139O88245 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC15.79■□□□□ 0.12
Gm10139O88245 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC15.79■□□□□ 0.12
Gm10139O88245 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gm10139O88245 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm10139O88245 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm10139O88245 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Gm10139O88245 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC15.77■□□□□ 0.12
Gm10139O88245 Gm9905-201ENSMUST00000065740 1845 ntBASIC15.76■□□□□ 0.11
Gm10139O88245 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gm10139O88245 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Gm10139O88245 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Gm10139O88245 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gm10139O88245 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm10139O88245 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm10139O88245 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Gm10139O88245 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm10139O88245 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm10139O88245 AC166822.3-201ENSMUST00000227394 661 ntBASIC15.72■□□□□ 0.11
Gm10139O88245 Gm17082-201ENSMUST00000166043 1091 ntBASIC15.71■□□□□ 0.11
Gm10139O88245 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Gm10139O88245 Zxda-201ENSMUST00000117281 2621 ntBASIC15.71■□□□□ 0.11
Gm10139O88245 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10139O88245 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC15.7■□□□□ 0.1
Gm10139O88245 Gm6206-201ENSMUST00000133472 2199 ntBASIC15.7■□□□□ 0.1
Gm10139O88245 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm10139O88245 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Gm10139O88245 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
Gm10139O88245 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm10139O88245 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm10139O88245 Gm27322-201ENSMUST00000184007 104 ntBASIC15.66■□□□□ 0.1
Gm10139O88245 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
Gm10139O88245 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Gm10139O88245 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm10139O88245 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Gm10139O88245 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm10139O88245 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm10139O88245 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Gm10139O88245 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm10139O88245 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Gm10139O88245 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm10139O88245 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm10139O88245 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm10139O88245 Gm43445-201ENSMUST00000198564 2091 ntBASIC15.61■□□□□ 0.09
Gm10139O88245 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm10139O88245 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Gm10139O88245 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm10139O88245 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Gm10139O88245 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Gm10139O88245 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Gm10139O88245 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm10139O88245 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC15.56■□□□□ 0.08
Gm10139O88245 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm10139O88245 Gm6345-201ENSMUST00000180378 1691 ntBASIC15.56■□□□□ 0.08
Gm10139O88245 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm10139O88245 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm10139O88245 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC15.54■□□□□ 0.08
Gm10139O88245 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC15.53■□□□□ 0.08
Gm10139O88245 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm10139O88245 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm10139O88245 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm10139O88245 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm10139O88245 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gm10139O88245 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms