Protein–RNA interactions for Protein: O70343

Ppargc1a, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppargc1aO70343 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Ppargc1aO70343 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Ppargc1aO70343 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.3■■□□□ 1.96
Ppargc1aO70343 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ppargc1aO70343 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Ppargc1aO70343 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ppargc1aO70343 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.26■■□□□ 1.95
Ppargc1aO70343 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ppargc1aO70343 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.22■■□□□ 1.95
Ppargc1aO70343 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Ppargc1aO70343 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.21■■□□□ 1.95
Ppargc1aO70343 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.18■■□□□ 1.94
Ppargc1aO70343 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
Ppargc1aO70343 Gm24804-201ENSMUST00000174982 85 ntBASIC27.15■■□□□ 1.94
Ppargc1aO70343 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ppargc1aO70343 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ppargc1aO70343 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ppargc1aO70343 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ppargc1aO70343 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.08■■□□□ 1.93
Ppargc1aO70343 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Ppargc1aO70343 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Ppargc1aO70343 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ppargc1aO70343 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ppargc1aO70343 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ppargc1aO70343 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ppargc1aO70343 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ppargc1aO70343 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27■■□□□ 1.91
Ppargc1aO70343 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27■■□□□ 1.91
Ppargc1aO70343 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.99■■□□□ 1.91
Ppargc1aO70343 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
Ppargc1aO70343 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ppargc1aO70343 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ppargc1aO70343 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ppargc1aO70343 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ppargc1aO70343 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ppargc1aO70343 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ppargc1aO70343 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ppargc1aO70343 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Ppargc1aO70343 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.9■■□□□ 1.9
Ppargc1aO70343 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.9■■□□□ 1.9
Ppargc1aO70343 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ppargc1aO70343 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
Ppargc1aO70343 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ppargc1aO70343 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
Ppargc1aO70343 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ppargc1aO70343 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ppargc1aO70343 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Ppargc1aO70343 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ppargc1aO70343 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Ppargc1aO70343 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Ppargc1aO70343 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
Ppargc1aO70343 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Ppargc1aO70343 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ppargc1aO70343 Peli2-204ENSMUST00000226513 1320 ntBASIC26.81■■□□□ 1.88
Ppargc1aO70343 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ppargc1aO70343 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ppargc1aO70343 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
Ppargc1aO70343 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Ppargc1aO70343 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ppargc1aO70343 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Ppargc1aO70343 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ppargc1aO70343 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.77■■□□□ 1.88
Ppargc1aO70343 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Ppargc1aO70343 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
Ppargc1aO70343 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.75■■□□□ 1.87
Ppargc1aO70343 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ppargc1aO70343 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Ppargc1aO70343 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ppargc1aO70343 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ppargc1aO70343 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
Ppargc1aO70343 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ppargc1aO70343 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Ppargc1aO70343 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.67■■□□□ 1.86
Ppargc1aO70343 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ppargc1aO70343 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ppargc1aO70343 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.66■■□□□ 1.86
Ppargc1aO70343 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ppargc1aO70343 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
Ppargc1aO70343 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Ppargc1aO70343 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ppargc1aO70343 Gm16148-201ENSMUST00000119653 893 ntBASIC26.59■■□□□ 1.85
Ppargc1aO70343 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ppargc1aO70343 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ppargc1aO70343 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ppargc1aO70343 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
Ppargc1aO70343 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ppargc1aO70343 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ppargc1aO70343 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ppargc1aO70343 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ppargc1aO70343 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ppargc1aO70343 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.53■■□□□ 1.84
Ppargc1aO70343 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ppargc1aO70343 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ppargc1aO70343 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ppargc1aO70343 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ppargc1aO70343 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
Ppargc1aO70343 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ppargc1aO70343 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ppargc1aO70343 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ppargc1aO70343 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms