Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.37■■□□□ 1.33
Raet1cO08604 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.34■■□□□ 1.33
Raet1cO08604 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Raet1cO08604 Gm8109-201ENSMUST00000194076 746 ntBASIC23.32■■□□□ 1.32
Raet1cO08604 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.32■■□□□ 1.32
Raet1cO08604 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.31■■□□□ 1.32
Raet1cO08604 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Raet1cO08604 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Raet1cO08604 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.28■■□□□ 1.32
Raet1cO08604 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Raet1cO08604 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Raet1cO08604 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Raet1cO08604 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Raet1cO08604 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.24■■□□□ 1.31
Raet1cO08604 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Raet1cO08604 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Raet1cO08604 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Raet1cO08604 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
Raet1cO08604 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Raet1cO08604 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Raet1cO08604 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Raet1cO08604 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Raet1cO08604 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Raet1cO08604 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Raet1cO08604 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Raet1cO08604 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Raet1cO08604 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Raet1cO08604 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Raet1cO08604 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Raet1cO08604 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Raet1cO08604 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Raet1cO08604 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.05■■□□□ 1.28
Raet1cO08604 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Raet1cO08604 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
Raet1cO08604 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Raet1cO08604 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Raet1cO08604 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Raet1cO08604 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Raet1cO08604 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Raet1cO08604 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Raet1cO08604 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Raet1cO08604 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Raet1cO08604 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Raet1cO08604 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Raet1cO08604 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.94■■□□□ 1.26
Raet1cO08604 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Raet1cO08604 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Raet1cO08604 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Raet1cO08604 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Raet1cO08604 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Raet1cO08604 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Raet1cO08604 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Raet1cO08604 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.9■■□□□ 1.26
Raet1cO08604 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Raet1cO08604 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Raet1cO08604 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Raet1cO08604 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.85■■□□□ 1.25
Raet1cO08604 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.85■■□□□ 1.25
Raet1cO08604 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Raet1cO08604 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Raet1cO08604 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Raet1cO08604 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Raet1cO08604 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Raet1cO08604 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Raet1cO08604 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Raet1cO08604 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Raet1cO08604 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Raet1cO08604 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.8■■□□□ 1.24
Raet1cO08604 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Raet1cO08604 Peli2-204ENSMUST00000226513 1320 ntBASIC22.79■■□□□ 1.24
Raet1cO08604 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Raet1cO08604 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Raet1cO08604 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Raet1cO08604 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.76■■□□□ 1.23
Raet1cO08604 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Raet1cO08604 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Raet1cO08604 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Raet1cO08604 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Raet1cO08604 Gm24804-201ENSMUST00000174982 85 ntBASIC22.72■■□□□ 1.23
Raet1cO08604 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Raet1cO08604 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Raet1cO08604 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Raet1cO08604 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.7■■□□□ 1.22
Raet1cO08604 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Raet1cO08604 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
Raet1cO08604 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Raet1cO08604 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Raet1cO08604 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Raet1cO08604 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Raet1cO08604 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Raet1cO08604 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Raet1cO08604 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Raet1cO08604 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Raet1cO08604 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Raet1cO08604 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.63■■□□□ 1.21
Raet1cO08604 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Raet1cO08604 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Raet1cO08604 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.61■■□□□ 1.21
Raet1cO08604 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Raet1cO08604 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms