Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Herc1E9PZP8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Herc1E9PZP8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Herc1E9PZP8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Herc1E9PZP8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Herc1E9PZP8 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.06■□□□□ 0.16
Herc1E9PZP8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Herc1E9PZP8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.03■□□□□ 0.16
Herc1E9PZP8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.02■□□□□ 0.16
Herc1E9PZP8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Herc1E9PZP8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Herc1E9PZP8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.02■□□□□ 0.15
Herc1E9PZP8 Gm6821-201ENSMUST00000107540 542 ntBASIC15.99■□□□□ 0.15
Herc1E9PZP8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Herc1E9PZP8 Mir6538-201ENSMUST00000183713 110 ntBASIC15.97■□□□□ 0.15
Herc1E9PZP8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Herc1E9PZP8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Herc1E9PZP8 Peli2-204ENSMUST00000226513 1320 ntBASIC15.96■□□□□ 0.15
Herc1E9PZP8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Herc1E9PZP8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
Herc1E9PZP8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Herc1E9PZP8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Herc1E9PZP8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Herc1E9PZP8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.93■□□□□ 0.14
Herc1E9PZP8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.92■□□□□ 0.14
Herc1E9PZP8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.92■□□□□ 0.14
Herc1E9PZP8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Herc1E9PZP8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Herc1E9PZP8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC15.88■□□□□ 0.13
Herc1E9PZP8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Herc1E9PZP8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Herc1E9PZP8 Gm11175-201ENSMUST00000116172 543 ntBASIC15.86■□□□□ 0.13
Herc1E9PZP8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Herc1E9PZP8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Herc1E9PZP8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Herc1E9PZP8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.85■□□□□ 0.13
Herc1E9PZP8 Gm24970-201ENSMUST00000175582 82 ntBASIC15.84■□□□□ 0.13
Herc1E9PZP8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Herc1E9PZP8 Cap2-205ENSMUST00000225824 1634 ntBASIC15.83■□□□□ 0.13
Herc1E9PZP8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Herc1E9PZP8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Herc1E9PZP8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC15.78■□□□□ 0.12
Herc1E9PZP8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Herc1E9PZP8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Herc1E9PZP8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC15.77■□□□□ 0.11
Herc1E9PZP8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.77■□□□□ 0.11
Herc1E9PZP8 AL845457.1-201ENSMUST00000197244 68 ntBASIC15.76■□□□□ 0.11
Herc1E9PZP8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC15.76■□□□□ 0.11
Herc1E9PZP8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Herc1E9PZP8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Herc1E9PZP8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc1E9PZP8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc1E9PZP8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Herc1E9PZP8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Herc1E9PZP8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.67■□□□□ 0.1
Herc1E9PZP8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Herc1E9PZP8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herc1E9PZP8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herc1E9PZP8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Herc1E9PZP8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Herc1E9PZP8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Herc1E9PZP8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Herc1E9PZP8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Herc1E9PZP8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Herc1E9PZP8 Gm7432-201ENSMUST00000210343 879 ntBASIC15.61■□□□□ 0.09
Herc1E9PZP8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Herc1E9PZP8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC15.61■□□□□ 0.09
Herc1E9PZP8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
Herc1E9PZP8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Herc1E9PZP8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Herc1E9PZP8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Herc1E9PZP8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Herc1E9PZP8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Herc1E9PZP8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Herc1E9PZP8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Herc1E9PZP8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Herc1E9PZP8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC15.54■□□□□ 0.08
Herc1E9PZP8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Herc1E9PZP8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC15.54■□□□□ 0.08
Herc1E9PZP8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Herc1E9PZP8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Herc1E9PZP8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Herc1E9PZP8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
Herc1E9PZP8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Herc1E9PZP8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC15.5■□□□□ 0.07
Herc1E9PZP8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Herc1E9PZP8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC15.5■□□□□ 0.07
Herc1E9PZP8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Herc1E9PZP8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Herc1E9PZP8 Gm22567-201ENSMUST00000175542 342 ntBASIC15.48■□□□□ 0.07
Herc1E9PZP8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC15.48■□□□□ 0.07
Herc1E9PZP8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Herc1E9PZP8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Herc1E9PZP8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Herc1E9PZP8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.46■□□□□ 0.07
Herc1E9PZP8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Herc1E9PZP8 Gm42809-201ENSMUST00000198429 1138 ntBASIC15.44■□□□□ 0.06
Herc1E9PZP8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Herc1E9PZP8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Herc1E9PZP8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms