Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Herc1E9PZP8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Herc1E9PZP8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Herc1E9PZP8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Herc1E9PZP8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Herc1E9PZP8 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.06■□□□□ 0.16
Herc1E9PZP8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Herc1E9PZP8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.03■□□□□ 0.16
Herc1E9PZP8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.02■□□□□ 0.16
Herc1E9PZP8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Herc1E9PZP8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Herc1E9PZP8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.02■□□□□ 0.15
Herc1E9PZP8 Gm6821-201ENSMUST00000107540 542 ntBASIC15.99■□□□□ 0.15
Herc1E9PZP8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Herc1E9PZP8 Mir6538-201ENSMUST00000183713 110 ntBASIC15.97■□□□□ 0.15
Herc1E9PZP8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Herc1E9PZP8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Herc1E9PZP8 Peli2-204ENSMUST00000226513 1320 ntBASIC15.96■□□□□ 0.15
Herc1E9PZP8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Herc1E9PZP8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
Herc1E9PZP8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Herc1E9PZP8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Herc1E9PZP8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Herc1E9PZP8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.93■□□□□ 0.14
Herc1E9PZP8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.92■□□□□ 0.14
Herc1E9PZP8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.92■□□□□ 0.14
Herc1E9PZP8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Herc1E9PZP8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Herc1E9PZP8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC15.88■□□□□ 0.13
Herc1E9PZP8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Herc1E9PZP8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Herc1E9PZP8 Gm11175-201ENSMUST00000116172 543 ntBASIC15.86■□□□□ 0.13
Herc1E9PZP8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Herc1E9PZP8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Herc1E9PZP8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Herc1E9PZP8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.85■□□□□ 0.13
Herc1E9PZP8 Gm24970-201ENSMUST00000175582 82 ntBASIC15.84■□□□□ 0.13
Herc1E9PZP8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Herc1E9PZP8 Cap2-205ENSMUST00000225824 1634 ntBASIC15.83■□□□□ 0.13
Herc1E9PZP8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Herc1E9PZP8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Herc1E9PZP8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC15.78■□□□□ 0.12
Herc1E9PZP8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Herc1E9PZP8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Herc1E9PZP8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC15.77■□□□□ 0.11
Herc1E9PZP8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.77■□□□□ 0.11
Herc1E9PZP8 AL845457.1-201ENSMUST00000197244 68 ntBASIC15.76■□□□□ 0.11
Herc1E9PZP8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC15.76■□□□□ 0.11
Herc1E9PZP8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Herc1E9PZP8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Herc1E9PZP8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc1E9PZP8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc1E9PZP8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Herc1E9PZP8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Herc1E9PZP8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.67■□□□□ 0.1
Herc1E9PZP8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Herc1E9PZP8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herc1E9PZP8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herc1E9PZP8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Herc1E9PZP8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Herc1E9PZP8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Herc1E9PZP8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Herc1E9PZP8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Herc1E9PZP8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Herc1E9PZP8 Gm7432-201ENSMUST00000210343 879 ntBASIC15.61■□□□□ 0.09
Herc1E9PZP8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Herc1E9PZP8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC15.61■□□□□ 0.09
Herc1E9PZP8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
Herc1E9PZP8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Herc1E9PZP8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Herc1E9PZP8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Herc1E9PZP8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Herc1E9PZP8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Herc1E9PZP8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Herc1E9PZP8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Herc1E9PZP8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Herc1E9PZP8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC15.54■□□□□ 0.08
Herc1E9PZP8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Herc1E9PZP8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC15.54■□□□□ 0.08
Herc1E9PZP8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Herc1E9PZP8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Herc1E9PZP8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Herc1E9PZP8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
Herc1E9PZP8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Herc1E9PZP8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC15.5■□□□□ 0.07
Herc1E9PZP8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Herc1E9PZP8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC15.5■□□□□ 0.07
Herc1E9PZP8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Herc1E9PZP8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Herc1E9PZP8 Gm22567-201ENSMUST00000175542 342 ntBASIC15.48■□□□□ 0.07
Herc1E9PZP8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC15.48■□□□□ 0.07
Herc1E9PZP8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Herc1E9PZP8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Herc1E9PZP8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Herc1E9PZP8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.46■□□□□ 0.07
Herc1E9PZP8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Herc1E9PZP8 Gm42809-201ENSMUST00000198429 1138 ntBASIC15.44■□□□□ 0.06
Herc1E9PZP8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Herc1E9PZP8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Herc1E9PZP8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms