Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp8O70404 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp8O70404 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Vamp8O70404 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp8O70404 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Vamp8O70404 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.34□□□□□ -0.11
Vamp8O70404 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC14.34□□□□□ -0.11
Vamp8O70404 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.34□□□□□ -0.11
Vamp8O70404 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.34□□□□□ -0.11
Vamp8O70404 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp8O70404 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.34□□□□□ -0.11
Vamp8O70404 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp8O70404 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp8O70404 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp8O70404 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp8O70404 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vamp8O70404 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp8O70404 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp8O70404 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vamp8O70404 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Vamp8O70404 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp8O70404 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp8O70404 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp8O70404 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp8O70404 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp8O70404 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp8O70404 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp8O70404 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp8O70404 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vamp8O70404 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp8O70404 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp8O70404 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp8O70404 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp8O70404 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Vamp8O70404 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp8O70404 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp8O70404 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vamp8O70404 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vamp8O70404 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp8O70404 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp8O70404 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vamp8O70404 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp8O70404 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp8O70404 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vamp8O70404 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.32□□□□□ -0.12
Vamp8O70404 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp8O70404 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp8O70404 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp8O70404 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Vamp8O70404 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.31□□□□□ -0.12
Vamp8O70404 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp8O70404 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp8O70404 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp8O70404 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Vamp8O70404 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp8O70404 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp8O70404 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.3□□□□□ -0.12
Vamp8O70404 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.3□□□□□ -0.12
Vamp8O70404 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp8O70404 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp8O70404 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp8O70404 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp8O70404 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.3□□□□□ -0.12
Vamp8O70404 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp8O70404 Gm7199-201ENSMUST00000118327 1485 ntBASIC14.3□□□□□ -0.12
Vamp8O70404 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp8O70404 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Vamp8O70404 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp8O70404 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp8O70404 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp8O70404 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp8O70404 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp8O70404 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC14.29□□□□□ -0.12
Vamp8O70404 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp8O70404 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vamp8O70404 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vamp8O70404 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp8O70404 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vamp8O70404 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vamp8O70404 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp8O70404 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vamp8O70404 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp8O70404 Gm5987-201ENSMUST00000196433 1151 ntBASIC14.28□□□□□ -0.12
Vamp8O70404 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp8O70404 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp8O70404 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vamp8O70404 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp8O70404 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.28□□□□□ -0.12
Vamp8O70404 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vamp8O70404 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp8O70404 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp8O70404 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp8O70404 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp8O70404 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp8O70404 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp8O70404 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp8O70404 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vamp8O70404 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Vamp8O70404 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Vamp8O70404 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 148.2 ms