Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q8VDP2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q8VDP2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Q8VDP2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Q8VDP2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q8VDP2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Q8VDP2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q8VDP2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q8VDP2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q8VDP2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q8VDP2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q8VDP2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q8VDP2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q8VDP2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q8VDP2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q8VDP2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q8VDP2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q8VDP2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.91■□□□□ 0.78
Q8VDP2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q8VDP2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.91■□□□□ 0.78
Q8VDP2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Q8VDP2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8VDP2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8VDP2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Q8VDP2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8VDP2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8VDP2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Q8VDP2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8VDP2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Q8VDP2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Q8VDP2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Q8VDP2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q8VDP2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q8VDP2 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.89■□□□□ 0.77
Q8VDP2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q8VDP2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q8VDP2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q8VDP2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Q8VDP2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.88■□□□□ 0.77
Q8VDP2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.88■□□□□ 0.77
Q8VDP2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Q8VDP2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q8VDP2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q8VDP2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q8VDP2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Q8VDP2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q8VDP2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q8VDP2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q8VDP2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.86■□□□□ 0.77
Q8VDP2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Q8VDP2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q8VDP2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q8VDP2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q8VDP2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q8VDP2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Q8VDP2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q8VDP2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Q8VDP2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q8VDP2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Q8VDP2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Q8VDP2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q8VDP2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Q8VDP2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q8VDP2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q8VDP2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q8VDP2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.84■□□□□ 0.77
Q8VDP2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Q8VDP2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q8VDP2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.84■□□□□ 0.77
Q8VDP2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Q8VDP2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Q8VDP2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q8VDP2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
Q8VDP2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Q8VDP2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q8VDP2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q8VDP2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q8VDP2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q8VDP2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q8VDP2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q8VDP2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q8VDP2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Q8VDP2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q8VDP2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q8VDP2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q8VDP2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q8VDP2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q8VDP2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q8VDP2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q8VDP2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q8VDP2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Q8VDP2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q8VDP2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Q8VDP2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q8VDP2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q8VDP2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Q8VDP2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q8VDP2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Q8VDP2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Q8VDP2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms