Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
P06320 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06320 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06320 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06320 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06320 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P06320 Terc-201ENSMUST00000082862 423 ntBASIC13.03□□□□□ -0.32
P06320 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06320 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06320 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC13.03□□□□□ -0.32
P06320 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P06320 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06320 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06320 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P06320 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
P06320 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06320 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06320 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06320 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC13.02□□□□□ -0.33
P06320 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06320 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06320 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P06320 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC13.01□□□□□ -0.33
P06320 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06320 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06320 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06320 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06320 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06320 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC13.01□□□□□ -0.33
P06320 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06320 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06320 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06320 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06320 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06320 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06320 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P06320 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P06320 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06320 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P06320 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P06320 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P06320 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
P06320 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC13□□□□□ -0.33
P06320 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P06320 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC13□□□□□ -0.33
P06320 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC13□□□□□ -0.33
P06320 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC13□□□□□ -0.33
P06320 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06320 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06320 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13□□□□□ -0.33
P06320 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
P06320 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06320 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06320 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06320 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P06320 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06320 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06320 Kdm3b-204ENSMUST00000224715 2032 ntBASIC13□□□□□ -0.33
P06320 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06320 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
P06320 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06320 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
P06320 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
P06320 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P06320 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06320 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06320 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06320 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06320 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
P06320 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
P06320 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC12.98□□□□□ -0.33
P06320 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
P06320 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06320 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06320 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06320 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06320 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC12.98□□□□□ -0.33
P06320 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06320 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC12.98□□□□□ -0.33
P06320 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
P06320 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06320 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P06320 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P06320 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06320 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06320 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06320 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06320 Gm43403-201ENSMUST00000198011 1786 ntBASIC12.97□□□□□ -0.33
P06320 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06320 Gm12818-201ENSMUST00000117562 1349 ntBASIC12.97□□□□□ -0.33
P06320 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06320 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC12.97□□□□□ -0.33
P06320 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC12.97□□□□□ -0.33
P06320 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
P06320 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06320 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06320 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06320 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P06320 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
P06320 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms