Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp9P41245 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Mmp9P41245 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.29■□□□□ 0.36
Mmp9P41245 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp9P41245 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp9P41245 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Mmp9P41245 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp9P41245 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp9P41245 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.29■□□□□ 0.36
Mmp9P41245 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp9P41245 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp9P41245 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp9P41245 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp9P41245 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.28■□□□□ 0.36
Mmp9P41245 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Mmp9P41245 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp9P41245 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Mmp9P41245 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp9P41245 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp9P41245 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp9P41245 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp9P41245 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp9P41245 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp9P41245 Mir3960-201ENSMUST00000198213 73 ntBASIC17.27■□□□□ 0.36
Mmp9P41245 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp9P41245 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp9P41245 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp9P41245 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp9P41245 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.27■□□□□ 0.35
Mmp9P41245 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp9P41245 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp9P41245 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp9P41245 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp9P41245 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Mmp9P41245 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp9P41245 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp9P41245 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Mmp9P41245 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp9P41245 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp9P41245 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp9P41245 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp9P41245 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.25■□□□□ 0.35
Mmp9P41245 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp9P41245 Gm11687-201ENSMUST00000118911 886 ntBASIC17.25■□□□□ 0.35
Mmp9P41245 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.25■□□□□ 0.35
Mmp9P41245 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp9P41245 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp9P41245 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Mmp9P41245 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Mmp9P41245 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp9P41245 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp9P41245 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp9P41245 Scarna2-201ENSMUST00000157560 414 ntBASIC17.24■□□□□ 0.35
Mmp9P41245 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp9P41245 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp9P41245 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp9P41245 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp9P41245 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp9P41245 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp9P41245 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp9P41245 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Mmp9P41245 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Mmp9P41245 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Mmp9P41245 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.23■□□□□ 0.35
Mmp9P41245 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp9P41245 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp9P41245 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp9P41245 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp9P41245 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp9P41245 Gm15039-201ENSMUST00000118914 875 ntBASIC17.22■□□□□ 0.35
Mmp9P41245 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.22■□□□□ 0.35
Mmp9P41245 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp9P41245 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp9P41245 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.22■□□□□ 0.35
Mmp9P41245 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp9P41245 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp9P41245 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Mmp9P41245 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp9P41245 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp9P41245 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp9P41245 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp9P41245 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Mmp9P41245 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp9P41245 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Mmp9P41245 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Mmp9P41245 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp9P41245 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Mmp9P41245 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp9P41245 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp9P41245 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.2■□□□□ 0.34
Mmp9P41245 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Mmp9P41245 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp9P41245 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp9P41245 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.2■□□□□ 0.34
Mmp9P41245 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp9P41245 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp9P41245 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp9P41245 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp9P41245 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp9P41245 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 165.2 ms