Protein–RNA interactions for Protein: A0A0G2JDF5

Trav14n-2, T cell receptor alpha variable 14D-2 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-2A0A0G2JDF5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav14n-2A0A0G2JDF5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav14n-2A0A0G2JDF5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav14n-2A0A0G2JDF5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.27■□□□□ 0.04
Trav14n-2A0A0G2JDF5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-2A0A0G2JDF5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.24■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Gm9812-201ENSMUST00000061934 968 ntBASIC15.24■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.23■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav14n-2A0A0G2JDF5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav14n-2A0A0G2JDF5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav14n-2A0A0G2JDF5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC15.2■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-2A0A0G2JDF5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav14n-2A0A0G2JDF5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms