Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.14e-7■□□□□ 8.1
XRN2Q9H0D6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.34■■□□□ 1.814e-7■□□□□ 8.1
XRN2Q9H0D6 COL9A3-207ENST00000467819 993 ntTSL 1 (best)25.62■■□□□ 1.694e-7■□□□□ 8.1
XRN2Q9H0D6 COL9A3-203ENST00000462700 1237 ntTSL 322.13■■□□□ 1.134e-7■□□□□ 8.1
XRN2Q9H0D6 COL9A3-208ENST00000469802 680 ntTSL 219.63■□□□□ 0.734e-7■□□□□ 8.1
XRN2Q9H0D6 COL9A3-205ENST00000466192 2194 ntTSL 219.02■□□□□ 0.634e-7■□□□□ 8.1
XRN2Q9H0D6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.48■□□□□ 0.554e-7■□□□□ 8.1
XRN2Q9H0D6 RAB17-207ENST00000416106 587 ntTSL 317.75■□□□□ 0.434e-7■□□□□ 8.1
XRN2Q9H0D6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.04■□□□□ 0.324e-7■□□□□ 8.1
XRN2Q9H0D6 AC009163.4-202ENST00000561887 137 ntTSL 214.08□□□□□ -0.164e-7■□□□□ 8.1
XRN2Q9H0D6 AC009163.4-203ENST00000566594 254 ntTSL 214.08□□□□□ -0.164e-7■□□□□ 8.1
XRN2Q9H0D6 TMEM170A-205ENST00000568559 4345 ntTSL 1 (best)12.85□□□□□ -0.354e-7■□□□□ 8.1
XRN2Q9H0D6 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC12.3□□□□□ -0.444e-7■□□□□ 8.1
XRN2Q9H0D6 TMEM170A-204ENST00000567796 734 ntTSL 5 BASIC10.69□□□□□ -0.74e-7■□□□□ 8.1
XRN2Q9H0D6 SLC2A1-205ENST00000475162 598 ntTSL 517.3■□□□□ 0.363e-8■□□□□ 8.1
XRN2Q9H0D6 EPS8L2-216ENST00000530118 561 ntTSL 319.96■□□□□ 0.791e-20■□□□□ 8.1
XRN2Q9H0D6 PNPLA2-204ENST00000529255 1301 ntTSL 1 (best)20.21■□□□□ 0.831e-8■□□□□ 8.1
XRN2Q9H0D6 PNPLA2-203ENST00000526083 465 ntTSL 219.5■□□□□ 0.711e-8■□□□□ 8.1
XRN2Q9H0D6 ID1-201ENST00000376105 1233 ntBASIC25.91■■□□□ 1.743e-6■□□□□ 8.1
XRN2Q9H0D6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.223e-6■□□□□ 8.1
XRN2Q9H0D6 AC024267.1-201ENST00000582320 895 ntBASIC18.38■□□□□ 0.533e-6■□□□□ 8.1
XRN2Q9H0D6 AC092127.1-201ENST00000567093 3455 ntBASIC16.59■□□□□ 0.251e-10■□□□□ 8.1
XRN2Q9H0D6 SLC4A2-210ENST00000480107 793 ntTSL 215.79■□□□□ 0.123e-6■□□□□ 8.1
XRN2Q9H0D6 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.183e-6■□□□□ 8.1
XRN2Q9H0D6 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC13.74□□□□□ -0.213e-6■□□□□ 8.1
XRN2Q9H0D6 LAS1L-205ENST00000484069 5205 ntTSL 213.04□□□□□ -0.323e-6■□□□□ 8.1
XRN2Q9H0D6 LAS1L-203ENST00000374811 2439 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.343e-6■□□□□ 8.1
XRN2Q9H0D6 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.413e-6■□□□□ 8.1
XRN2Q9H0D6 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.533e-6■□□□□ 8.1
XRN2Q9H0D6 C22orf34-206ENST00000444628 453 ntTSL 513.46□□□□□ -0.255e-9■□□□□ 8.1
XRN2Q9H0D6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.662e-9■□□□□ 8
XRN2Q9H0D6 KIZ-205ENST00000611685 1915 ntAPPRIS ALT2 TSL 216.35■□□□□ 0.212e-9■□□□□ 8
XRN2Q9H0D6 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.152e-9■□□□□ 8
XRN2Q9H0D6 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.232e-9■□□□□ 8
XRN2Q9H0D6 KIZ-210ENST00000619189 2130 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.452e-9■□□□□ 8
XRN2Q9H0D6 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.512e-9■□□□□ 8
XRN2Q9H0D6 ADNP-204ENST00000396032 4581 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.832e-9■□□□□ 8
XRN2Q9H0D6 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.912e-9■□□□□ 8
XRN2Q9H0D6 KIZ-202ENST00000423272 190 ntTSL 37.88□□□□□ -1.152e-9■□□□□ 8
XRN2Q9H0D6 KIZ-207ENST00000616679 3856 ntAPPRIS ALT2 TSL 57.72□□□□□ -1.172e-9■□□□□ 8
XRN2Q9H0D6 KIZ-214ENST00000621366 1397 ntAPPRIS ALT2 TSL 1 (best)4.74□□□□□ -1.652e-9■□□□□ 8
XRN2Q9H0D6 KIZ-209ENST00000619179 1663 ntAPPRIS ALT2 TSL 54.08□□□□□ -1.762e-9■□□□□ 8
XRN2Q9H0D6 KIZ-201ENST00000419359 517 ntTSL 23.88□□□□□ -1.792e-9■□□□□ 8
XRN2Q9H0D6 HNRNPA1-205ENST00000547566 1234 ntTSL 1 (best)19.65■□□□□ 0.744e-13■□□□□ 8
XRN2Q9H0D6 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC13.63□□□□□ -0.234e-13■□□□□ 8
XRN2Q9H0D6 CPNE1-214ENST00000435747 400 ntTSL 313.37□□□□□ -0.274e-13■□□□□ 8
XRN2Q9H0D6 HNRNPA1-203ENST00000546500 4121 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.684e-13■□□□□ 8
XRN2Q9H0D6 HNRNPA1-211ENST00000551665 925 ntTSL 29.88□□□□□ -0.834e-13■□□□□ 8
XRN2Q9H0D6 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC8.28□□□□□ -1.084e-13■□□□□ 8
XRN2Q9H0D6 DNM2-218ENST00000591701 863 ntTSL 315.96■□□□□ 0.152e-20■□□□□ 8
XRN2Q9H0D6 TMEM94-206ENST00000577380 554 ntTSL 429.25■■■□□ 2.273e-9■□□□□ 8
XRN2Q9H0D6 TMEM94-230ENST00000584383 500 ntTSL 325.77■■□□□ 1.723e-9■□□□□ 8
XRN2Q9H0D6 TMEM94-211ENST00000579707 566 ntTSL 525.69■■□□□ 1.73e-9■□□□□ 8
XRN2Q9H0D6 TMEM94-224ENST00000582186 565 ntTSL 425.45■■□□□ 1.663e-9■□□□□ 8
XRN2Q9H0D6 TMEM94-220ENST00000581519 545 ntTSL 424.74■■□□□ 1.553e-9■□□□□ 8
XRN2Q9H0D6 SLC2A8-213ENST00000485806 971 ntTSL 218.14■□□□□ 0.493e-9■□□□□ 8
XRN2Q9H0D6 TMEM94-213ENST00000580416 430 ntTSL 415.12■□□□□ 0.013e-9■□□□□ 8
XRN2Q9H0D6 TMEM94-218ENST00000581252 522 ntTSL 514.61□□□□□ -0.073e-9■□□□□ 8
XRN2Q9H0D6 TMEM94-232ENST00000585105 5632 ntTSL 214.42□□□□□ -0.13e-9■□□□□ 8
XRN2Q9H0D6 MGRN1-209ENST00000588015 651 ntTSL 513.97□□□□□ -0.173e-9■□□□□ 8
XRN2Q9H0D6 TMEM94-217ENST00000581085 5432 ntTSL 213.01□□□□□ -0.333e-9■□□□□ 8
XRN2Q9H0D6 ITPR2-201ENST00000242737 581 ntTSL 1 (best) BASIC12.7□□□□□ -0.383e-9■□□□□ 8
XRN2Q9H0D6 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.43e-9■□□□□ 8
XRN2Q9H0D6 TMEM94-209ENST00000579208 3543 ntTSL 5 BASIC11.57□□□□□ -0.563e-9■□□□□ 8
XRN2Q9H0D6 TMEM94-202ENST00000375248 4703 ntTSL 2 BASIC11.15□□□□□ -0.623e-9■□□□□ 8
XRN2Q9H0D6 ITPR2-209ENST00000545235 540 ntTSL 1 (best)10.47□□□□□ -0.733e-9■□□□□ 8
XRN2Q9H0D6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.53■□□□□ 0.888e-12■□□□□ 8
XRN2Q9H0D6 ACAP3-209ENST00000476572 819 ntTSL 518.62■□□□□ 0.578e-12■□□□□ 8
Retrieved 68 of 21,068 protein–RNA pairs in 85.5 ms