Protein–RNA interactions for Protein: Q9QZL0

Ripk3, Receptor-interacting serine/threonine-protein kinase 3, mousemouse

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk3Q9QZL0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32.88■■■□□ 2.85
Ripk3Q9QZL0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.88■■■□□ 2.85
Ripk3Q9QZL0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.85■■■□□ 2.85
Ripk3Q9QZL0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.85■■■□□ 2.85
Ripk3Q9QZL0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.84
Ripk3Q9QZL0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Ripk3Q9QZL0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Ripk3Q9QZL0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32.69■■■□□ 2.82
Ripk3Q9QZL0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.66■■■□□ 2.82
Ripk3Q9QZL0 Psd-208ENSMUST00000224556 2034 ntBASIC32.65■■■□□ 2.82
Ripk3Q9QZL0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Ripk3Q9QZL0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.64■■■□□ 2.82
Ripk3Q9QZL0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Ripk3Q9QZL0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
Ripk3Q9QZL0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
Ripk3Q9QZL0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC32.5■■■□□ 2.79
Ripk3Q9QZL0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.5■■■□□ 2.79
Ripk3Q9QZL0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ripk3Q9QZL0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Ripk3Q9QZL0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
Ripk3Q9QZL0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.38■■■□□ 2.77
Ripk3Q9QZL0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Ripk3Q9QZL0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Ripk3Q9QZL0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC32.3■■■□□ 2.76
Ripk3Q9QZL0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32.27■■■□□ 2.76
Ripk3Q9QZL0 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.26■■■□□ 2.75
Ripk3Q9QZL0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Ripk3Q9QZL0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
Ripk3Q9QZL0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
Ripk3Q9QZL0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Ripk3Q9QZL0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Ripk3Q9QZL0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Ripk3Q9QZL0 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.11■■■□□ 2.73
Ripk3Q9QZL0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Ripk3Q9QZL0 Gm16148-201ENSMUST00000119653 893 ntBASIC32.05■■■□□ 2.72
Ripk3Q9QZL0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Ripk3Q9QZL0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.71
Ripk3Q9QZL0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC32.01■■■□□ 2.71
Ripk3Q9QZL0 Gm5987-201ENSMUST00000196433 1151 ntBASIC32.01■■■□□ 2.71
Ripk3Q9QZL0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Ripk3Q9QZL0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
Ripk3Q9QZL0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ripk3Q9QZL0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
Ripk3Q9QZL0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Ripk3Q9QZL0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Ripk3Q9QZL0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ripk3Q9QZL0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31.86■■■□□ 2.69
Ripk3Q9QZL0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ripk3Q9QZL0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.83■■■□□ 2.69
Ripk3Q9QZL0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
Ripk3Q9QZL0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ripk3Q9QZL0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.82■■■□□ 2.68
Ripk3Q9QZL0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.77■■■□□ 2.68
Ripk3Q9QZL0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Ripk3Q9QZL0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ripk3Q9QZL0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ripk3Q9QZL0 Gm45855-201ENSMUST00000212546 880 ntBASIC31.72■■■□□ 2.67
Ripk3Q9QZL0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
Ripk3Q9QZL0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Ripk3Q9QZL0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.69■■■□□ 2.66
Ripk3Q9QZL0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Ripk3Q9QZL0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Ripk3Q9QZL0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.65■■■□□ 2.66
Ripk3Q9QZL0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Ripk3Q9QZL0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Ripk3Q9QZL0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Ripk3Q9QZL0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Ripk3Q9QZL0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Ripk3Q9QZL0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
Ripk3Q9QZL0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ripk3Q9QZL0 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.52■■■□□ 2.64
Ripk3Q9QZL0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
Ripk3Q9QZL0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Ripk3Q9QZL0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ripk3Q9QZL0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Ripk3Q9QZL0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ripk3Q9QZL0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Ripk3Q9QZL0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ripk3Q9QZL0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ripk3Q9QZL0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
Ripk3Q9QZL0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ripk3Q9QZL0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ripk3Q9QZL0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.4■■■□□ 2.62
Ripk3Q9QZL0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ripk3Q9QZL0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
Ripk3Q9QZL0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
Ripk3Q9QZL0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Ripk3Q9QZL0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ripk3Q9QZL0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Ripk3Q9QZL0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
Ripk3Q9QZL0 Peli2-204ENSMUST00000226513 1320 ntBASIC31.29■■■□□ 2.6
Ripk3Q9QZL0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Ripk3Q9QZL0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Ripk3Q9QZL0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ripk3Q9QZL0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ripk3Q9QZL0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ripk3Q9QZL0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ripk3Q9QZL0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Ripk3Q9QZL0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Ripk3Q9QZL0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms