Protein–RNA interactions for Protein: Q9EQR3

Kcnn1, Small conductance calcium-activated potassium channel protein 1, mousemouse

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnn1Q9EQR3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC35.46■■■■□ 3.27
Kcnn1Q9EQR3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
Kcnn1Q9EQR3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Kcnn1Q9EQR3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35.39■■■■□ 3.26
Kcnn1Q9EQR3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC35.37■■■■□ 3.25
Kcnn1Q9EQR3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
Kcnn1Q9EQR3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.37■■■■□ 3.25
Kcnn1Q9EQR3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Kcnn1Q9EQR3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC35.36■■■■□ 3.25
Kcnn1Q9EQR3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
Kcnn1Q9EQR3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Kcnn1Q9EQR3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
Kcnn1Q9EQR3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
Kcnn1Q9EQR3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC35.25■■■■□ 3.23
Kcnn1Q9EQR3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC35.24■■■■□ 3.23
Kcnn1Q9EQR3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC35.24■■■■□ 3.23
Kcnn1Q9EQR3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
Kcnn1Q9EQR3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.21■■■■□ 3.23
Kcnn1Q9EQR3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC35.19■■■■□ 3.22
Kcnn1Q9EQR3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC35.18■■■■□ 3.22
Kcnn1Q9EQR3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35.17■■■■□ 3.22
Kcnn1Q9EQR3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
Kcnn1Q9EQR3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC35.12■■■■□ 3.21
Kcnn1Q9EQR3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
Kcnn1Q9EQR3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
Kcnn1Q9EQR3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Kcnn1Q9EQR3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Kcnn1Q9EQR3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.96■■■■□ 3.19
Kcnn1Q9EQR3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
Kcnn1Q9EQR3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Kcnn1Q9EQR3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
Kcnn1Q9EQR3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Kcnn1Q9EQR3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
Kcnn1Q9EQR3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC34.84■■■■□ 3.17
Kcnn1Q9EQR3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC34.82■■■■□ 3.16
Kcnn1Q9EQR3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Kcnn1Q9EQR3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Kcnn1Q9EQR3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Kcnn1Q9EQR3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC34.76■■■■□ 3.15
Kcnn1Q9EQR3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
Kcnn1Q9EQR3 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.73■■■■□ 3.15
Kcnn1Q9EQR3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.72■■■■□ 3.15
Kcnn1Q9EQR3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Kcnn1Q9EQR3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
Kcnn1Q9EQR3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
Kcnn1Q9EQR3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC34.65■■■■□ 3.14
Kcnn1Q9EQR3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Kcnn1Q9EQR3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC34.55■■■■□ 3.12
Kcnn1Q9EQR3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
Kcnn1Q9EQR3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
Kcnn1Q9EQR3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC34.46■■■■□ 3.11
Kcnn1Q9EQR3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Kcnn1Q9EQR3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC34.44■■■■□ 3.1
Kcnn1Q9EQR3 Tdp2-203ENSMUST00000223804 1136 ntBASIC34.44■■■■□ 3.1
Kcnn1Q9EQR3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Kcnn1Q9EQR3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Kcnn1Q9EQR3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC34.42■■■■□ 3.1
Kcnn1Q9EQR3 AC166822.3-201ENSMUST00000227394 661 ntBASIC34.4■■■■□ 3.1
Kcnn1Q9EQR3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34.38■■■■□ 3.09
Kcnn1Q9EQR3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Kcnn1Q9EQR3 Gm16148-201ENSMUST00000119653 893 ntBASIC34.35■■■■□ 3.09
Kcnn1Q9EQR3 Gm42596-201ENSMUST00000196305 1958 ntBASIC34.31■■■■□ 3.08
Kcnn1Q9EQR3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
Kcnn1Q9EQR3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
Kcnn1Q9EQR3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC34.25■■■■□ 3.07
Kcnn1Q9EQR3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
Kcnn1Q9EQR3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
Kcnn1Q9EQR3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Kcnn1Q9EQR3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC34.19■■■■□ 3.06
Kcnn1Q9EQR3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Kcnn1Q9EQR3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC34.15■■■■□ 3.06
Kcnn1Q9EQR3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC34.15■■■■□ 3.06
Kcnn1Q9EQR3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC34.13■■■■□ 3.05
Kcnn1Q9EQR3 Gm5987-201ENSMUST00000196433 1151 ntBASIC34.13■■■■□ 3.05
Kcnn1Q9EQR3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC34.12■■■■□ 3.05
Kcnn1Q9EQR3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC34.09■■■■□ 3.05
Kcnn1Q9EQR3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
Kcnn1Q9EQR3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC34.06■■■■□ 3.04
Kcnn1Q9EQR3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC34.05■■■■□ 3.04
Kcnn1Q9EQR3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
Kcnn1Q9EQR3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Kcnn1Q9EQR3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34.01■■■■□ 3.03
Kcnn1Q9EQR3 Gm45855-201ENSMUST00000212546 880 ntBASIC33.98■■■■□ 3.03
Kcnn1Q9EQR3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC33.95■■■■□ 3.02
Kcnn1Q9EQR3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC33.94■■■■□ 3.02
Kcnn1Q9EQR3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC33.93■■■■□ 3.02
Kcnn1Q9EQR3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
Kcnn1Q9EQR3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC33.92■■■■□ 3.02
Kcnn1Q9EQR3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC33.92■■■■□ 3.02
Kcnn1Q9EQR3 AL845457.1-201ENSMUST00000197244 68 ntBASIC33.89■■■■□ 3.02
Kcnn1Q9EQR3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC33.87■■■■□ 3.01
Kcnn1Q9EQR3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC33.87■■■■□ 3.01
Kcnn1Q9EQR3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Kcnn1Q9EQR3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC33.86■■■■□ 3.01
Kcnn1Q9EQR3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC33.83■■■■□ 3.01
Kcnn1Q9EQR3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33.79■■■■□ 3
Kcnn1Q9EQR3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC33.78■■■■□ 3
Kcnn1Q9EQR3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
Kcnn1Q9EQR3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC33.78■■■■□ 3
Kcnn1Q9EQR3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■□□ 2.99
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms