Protein–RNA interactions for Protein: Q9CYC3

Tmem39a, Transmembrane protein 39A, mousemouse

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem39aQ9CYC3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Tmem39aQ9CYC3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.32■■■□□ 2.6
Tmem39aQ9CYC3 Gm24804-201ENSMUST00000174982 85 ntBASIC31.23■■■□□ 2.59
Tmem39aQ9CYC3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Tmem39aQ9CYC3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.19■■■□□ 2.58
Tmem39aQ9CYC3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
Tmem39aQ9CYC3 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.16■■■□□ 2.58
Tmem39aQ9CYC3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.15■■■□□ 2.58
Tmem39aQ9CYC3 Gm27322-201ENSMUST00000184007 104 ntBASIC31.13■■■□□ 2.57
Tmem39aQ9CYC3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Tmem39aQ9CYC3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Tmem39aQ9CYC3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Tmem39aQ9CYC3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
Tmem39aQ9CYC3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Tmem39aQ9CYC3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.05■■■□□ 2.56
Tmem39aQ9CYC3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
Tmem39aQ9CYC3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Tmem39aQ9CYC3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.96■■■□□ 2.55
Tmem39aQ9CYC3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.94■■■□□ 2.54
Tmem39aQ9CYC3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Tmem39aQ9CYC3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Tmem39aQ9CYC3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
Tmem39aQ9CYC3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Tmem39aQ9CYC3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Tmem39aQ9CYC3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Tmem39aQ9CYC3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Tmem39aQ9CYC3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Tmem39aQ9CYC3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Tmem39aQ9CYC3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Tmem39aQ9CYC3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.78■■■□□ 2.52
Tmem39aQ9CYC3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.77■■■□□ 2.52
Tmem39aQ9CYC3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Tmem39aQ9CYC3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
Tmem39aQ9CYC3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Tmem39aQ9CYC3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Tmem39aQ9CYC3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Tmem39aQ9CYC3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Tmem39aQ9CYC3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Tmem39aQ9CYC3 Zfp131-205ENSMUST00000223812 663 ntBASIC30.61■■■□□ 2.49
Tmem39aQ9CYC3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Tmem39aQ9CYC3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Tmem39aQ9CYC3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Tmem39aQ9CYC3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Tmem39aQ9CYC3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.51■■■□□ 2.47
Tmem39aQ9CYC3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Tmem39aQ9CYC3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Tmem39aQ9CYC3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Tmem39aQ9CYC3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Tmem39aQ9CYC3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Tmem39aQ9CYC3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Tmem39aQ9CYC3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.42■■■□□ 2.46
Tmem39aQ9CYC3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.42■■■□□ 2.46
Tmem39aQ9CYC3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Tmem39aQ9CYC3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
Tmem39aQ9CYC3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Tmem39aQ9CYC3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Tmem39aQ9CYC3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.31■■■□□ 2.44
Tmem39aQ9CYC3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Tmem39aQ9CYC3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Tmem39aQ9CYC3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.24■■■□□ 2.43
Tmem39aQ9CYC3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.23■■■□□ 2.43
Tmem39aQ9CYC3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Tmem39aQ9CYC3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Tmem39aQ9CYC3 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.18■■■□□ 2.42
Tmem39aQ9CYC3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Tmem39aQ9CYC3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
Tmem39aQ9CYC3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Tmem39aQ9CYC3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Tmem39aQ9CYC3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Tmem39aQ9CYC3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
Tmem39aQ9CYC3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Tmem39aQ9CYC3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Tmem39aQ9CYC3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Tmem39aQ9CYC3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Tmem39aQ9CYC3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Tmem39aQ9CYC3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30■■■□□ 2.39
Tmem39aQ9CYC3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Tmem39aQ9CYC3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Tmem39aQ9CYC3 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.95■■■□□ 2.39
Tmem39aQ9CYC3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.38
Tmem39aQ9CYC3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
Tmem39aQ9CYC3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
Tmem39aQ9CYC3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
Tmem39aQ9CYC3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Tmem39aQ9CYC3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
Tmem39aQ9CYC3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Tmem39aQ9CYC3 Gm16148-201ENSMUST00000119653 893 ntBASIC29.84■■■□□ 2.37
Tmem39aQ9CYC3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.84■■■□□ 2.37
Tmem39aQ9CYC3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Tmem39aQ9CYC3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Tmem39aQ9CYC3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.81■■■□□ 2.36
Tmem39aQ9CYC3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Tmem39aQ9CYC3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
Tmem39aQ9CYC3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Tmem39aQ9CYC3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.76■■■□□ 2.35
Tmem39aQ9CYC3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Tmem39aQ9CYC3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Tmem39aQ9CYC3 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.71■■■□□ 2.35
Tmem39aQ9CYC3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
Tmem39aQ9CYC3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms