Protein–RNA interactions for Protein: Q9CY62

Rnf181, E3 ubiquitin-protein ligase RNF181, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf181Q9CY62 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Rnf181Q9CY62 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Rnf181Q9CY62 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
Rnf181Q9CY62 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
Rnf181Q9CY62 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32.69■■■□□ 2.82
Rnf181Q9CY62 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Rnf181Q9CY62 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Rnf181Q9CY62 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC32.64■■■□□ 2.82
Rnf181Q9CY62 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.63■■■□□ 2.81
Rnf181Q9CY62 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Rnf181Q9CY62 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Rnf181Q9CY62 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Rnf181Q9CY62 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Rnf181Q9CY62 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Rnf181Q9CY62 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Rnf181Q9CY62 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Rnf181Q9CY62 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.48■■■□□ 2.79
Rnf181Q9CY62 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Rnf181Q9CY62 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Rnf181Q9CY62 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32.43■■■□□ 2.78
Rnf181Q9CY62 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Rnf181Q9CY62 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Rnf181Q9CY62 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Rnf181Q9CY62 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Rnf181Q9CY62 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
Rnf181Q9CY62 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Rnf181Q9CY62 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Rnf181Q9CY62 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Rnf181Q9CY62 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Rnf181Q9CY62 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Rnf181Q9CY62 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Rnf181Q9CY62 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
Rnf181Q9CY62 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Rnf181Q9CY62 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.15■■■□□ 2.74
Rnf181Q9CY62 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
Rnf181Q9CY62 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
Rnf181Q9CY62 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Rnf181Q9CY62 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32.01■■■□□ 2.71
Rnf181Q9CY62 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
Rnf181Q9CY62 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Rnf181Q9CY62 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Rnf181Q9CY62 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Rnf181Q9CY62 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Rnf181Q9CY62 Gm16148-201ENSMUST00000119653 893 ntBASIC31.85■■■□□ 2.69
Rnf181Q9CY62 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.83■■■□□ 2.69
Rnf181Q9CY62 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC31.83■■■□□ 2.69
Rnf181Q9CY62 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.82■■■□□ 2.68
Rnf181Q9CY62 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31.82■■■□□ 2.68
Rnf181Q9CY62 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.8■■■□□ 2.68
Rnf181Q9CY62 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Rnf181Q9CY62 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.78■■■□□ 2.68
Rnf181Q9CY62 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Rnf181Q9CY62 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.76■■■□□ 2.68
Rnf181Q9CY62 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Rnf181Q9CY62 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.75■■■□□ 2.67
Rnf181Q9CY62 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Rnf181Q9CY62 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Rnf181Q9CY62 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.71■■■□□ 2.67
Rnf181Q9CY62 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Rnf181Q9CY62 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Rnf181Q9CY62 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.66■■■□□ 2.66
Rnf181Q9CY62 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Rnf181Q9CY62 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rnf181Q9CY62 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Rnf181Q9CY62 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Rnf181Q9CY62 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Rnf181Q9CY62 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Rnf181Q9CY62 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Rnf181Q9CY62 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Rnf181Q9CY62 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.55■■■□□ 2.64
Rnf181Q9CY62 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.54■■■□□ 2.64
Rnf181Q9CY62 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Rnf181Q9CY62 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
Rnf181Q9CY62 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Rnf181Q9CY62 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.5■■■□□ 2.63
Rnf181Q9CY62 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Rnf181Q9CY62 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.49■■■□□ 2.63
Rnf181Q9CY62 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Rnf181Q9CY62 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Rnf181Q9CY62 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Rnf181Q9CY62 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Rnf181Q9CY62 Gm45855-201ENSMUST00000212546 880 ntBASIC31.42■■■□□ 2.62
Rnf181Q9CY62 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Rnf181Q9CY62 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Rnf181Q9CY62 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Rnf181Q9CY62 Peli2-204ENSMUST00000226513 1320 ntBASIC31.35■■■□□ 2.61
Rnf181Q9CY62 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
Rnf181Q9CY62 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Rnf181Q9CY62 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Rnf181Q9CY62 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.32■■■□□ 2.6
Rnf181Q9CY62 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rnf181Q9CY62 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rnf181Q9CY62 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rnf181Q9CY62 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rnf181Q9CY62 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Rnf181Q9CY62 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rnf181Q9CY62 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Rnf181Q9CY62 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
Rnf181Q9CY62 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.18■■■□□ 2.58
Rnf181Q9CY62 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms