Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.31■■□□□ 1.48
Scrt1Q99M85 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.29■■□□□ 1.48
Scrt1Q99M85 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.29■■□□□ 1.48
Scrt1Q99M85 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Scrt1Q99M85 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Scrt1Q99M85 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Scrt1Q99M85 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Scrt1Q99M85 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.19■■□□□ 1.46
Scrt1Q99M85 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Scrt1Q99M85 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Scrt1Q99M85 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Scrt1Q99M85 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Scrt1Q99M85 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Scrt1Q99M85 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Scrt1Q99M85 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Scrt1Q99M85 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Scrt1Q99M85 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Scrt1Q99M85 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Scrt1Q99M85 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.04■■□□□ 1.44
Scrt1Q99M85 Zfp131-205ENSMUST00000223812 663 ntBASIC24.01■■□□□ 1.43
Scrt1Q99M85 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Scrt1Q99M85 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Scrt1Q99M85 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Scrt1Q99M85 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Scrt1Q99M85 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Scrt1Q99M85 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.94■■□□□ 1.42
Scrt1Q99M85 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Scrt1Q99M85 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Scrt1Q99M85 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.92■■□□□ 1.42
Scrt1Q99M85 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Scrt1Q99M85 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.88■■□□□ 1.41
Scrt1Q99M85 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Scrt1Q99M85 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scrt1Q99M85 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Scrt1Q99M85 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scrt1Q99M85 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.84■■□□□ 1.41
Scrt1Q99M85 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scrt1Q99M85 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Scrt1Q99M85 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.8■■□□□ 1.4
Scrt1Q99M85 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scrt1Q99M85 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scrt1Q99M85 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Scrt1Q99M85 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scrt1Q99M85 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.72■■□□□ 1.39
Scrt1Q99M85 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Scrt1Q99M85 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Scrt1Q99M85 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Scrt1Q99M85 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Scrt1Q99M85 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.63■■□□□ 1.37
Scrt1Q99M85 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.62■■□□□ 1.37
Scrt1Q99M85 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scrt1Q99M85 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scrt1Q99M85 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Scrt1Q99M85 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Scrt1Q99M85 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.56■■□□□ 1.36
Scrt1Q99M85 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Scrt1Q99M85 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Scrt1Q99M85 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Scrt1Q99M85 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Scrt1Q99M85 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Scrt1Q99M85 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Scrt1Q99M85 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Scrt1Q99M85 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Scrt1Q99M85 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
Scrt1Q99M85 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Scrt1Q99M85 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.43■■□□□ 1.34
Scrt1Q99M85 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Scrt1Q99M85 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scrt1Q99M85 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Scrt1Q99M85 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.38■■□□□ 1.33
Scrt1Q99M85 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Scrt1Q99M85 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Scrt1Q99M85 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Scrt1Q99M85 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Scrt1Q99M85 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.32■■□□□ 1.32
Scrt1Q99M85 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scrt1Q99M85 Gm16148-201ENSMUST00000119653 893 ntBASIC23.31■■□□□ 1.32
Scrt1Q99M85 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Scrt1Q99M85 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.28■■□□□ 1.32
Scrt1Q99M85 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Scrt1Q99M85 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Scrt1Q99M85 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Scrt1Q99M85 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Scrt1Q99M85 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Scrt1Q99M85 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Scrt1Q99M85 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Scrt1Q99M85 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.19■■□□□ 1.3
Scrt1Q99M85 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.19■■□□□ 1.3
Scrt1Q99M85 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Scrt1Q99M85 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
Scrt1Q99M85 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Scrt1Q99M85 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Scrt1Q99M85 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Scrt1Q99M85 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scrt1Q99M85 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scrt1Q99M85 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Scrt1Q99M85 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scrt1Q99M85 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scrt1Q99M85 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.1■■□□□ 1.29
Scrt1Q99M85 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms