Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Pcdhga6Q91XY2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.47■■□□□ 1.99
Pcdhga6Q91XY2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdhga6Q91XY2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdhga6Q91XY2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Pcdhga6Q91XY2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Pcdhga6Q91XY2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pcdhga6Q91XY2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Pcdhga6Q91XY2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pcdhga6Q91XY2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Pcdhga6Q91XY2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Pcdhga6Q91XY2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Pcdhga6Q91XY2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Pcdhga6Q91XY2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Pcdhga6Q91XY2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.24■■□□□ 1.95
Pcdhga6Q91XY2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.24■■□□□ 1.95
Pcdhga6Q91XY2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pcdhga6Q91XY2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pcdhga6Q91XY2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Pcdhga6Q91XY2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Pcdhga6Q91XY2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Pcdhga6Q91XY2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.15■■□□□ 1.94
Pcdhga6Q91XY2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Pcdhga6Q91XY2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.15■■□□□ 1.94
Pcdhga6Q91XY2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Pcdhga6Q91XY2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.08■■□□□ 1.93
Pcdhga6Q91XY2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pcdhga6Q91XY2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Pcdhga6Q91XY2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Pcdhga6Q91XY2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Pcdhga6Q91XY2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Pcdhga6Q91XY2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdhga6Q91XY2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdhga6Q91XY2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Pcdhga6Q91XY2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdhga6Q91XY2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdhga6Q91XY2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Pcdhga6Q91XY2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Pcdhga6Q91XY2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Pcdhga6Q91XY2 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.85■■□□□ 1.89
Pcdhga6Q91XY2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Pcdhga6Q91XY2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Pcdhga6Q91XY2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.8■■□□□ 1.88
Pcdhga6Q91XY2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdhga6Q91XY2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdhga6Q91XY2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Pcdhga6Q91XY2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdhga6Q91XY2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Pcdhga6Q91XY2 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.76■■□□□ 1.87
Pcdhga6Q91XY2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Pcdhga6Q91XY2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdhga6Q91XY2 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.67■■□□□ 1.86
Pcdhga6Q91XY2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.66■■□□□ 1.86
Pcdhga6Q91XY2 Gm16148-201ENSMUST00000119653 893 ntBASIC26.65■■□□□ 1.86
Pcdhga6Q91XY2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdhga6Q91XY2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Pcdhga6Q91XY2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Pcdhga6Q91XY2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdhga6Q91XY2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdhga6Q91XY2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhga6Q91XY2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdhga6Q91XY2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdhga6Q91XY2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.53■■□□□ 1.84
Pcdhga6Q91XY2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.49■■□□□ 1.83
Pcdhga6Q91XY2 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.49■■□□□ 1.83
Pcdhga6Q91XY2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
Pcdhga6Q91XY2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdhga6Q91XY2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdhga6Q91XY2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
Pcdhga6Q91XY2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdhga6Q91XY2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Pcdhga6Q91XY2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhga6Q91XY2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhga6Q91XY2 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.38■■□□□ 1.81
Pcdhga6Q91XY2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhga6Q91XY2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhga6Q91XY2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.36■■□□□ 1.81
Pcdhga6Q91XY2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhga6Q91XY2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.35■■□□□ 1.81
Pcdhga6Q91XY2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdhga6Q91XY2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdhga6Q91XY2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdhga6Q91XY2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Pcdhga6Q91XY2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdhga6Q91XY2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.31■■□□□ 1.8
Pcdhga6Q91XY2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Pcdhga6Q91XY2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdhga6Q91XY2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdhga6Q91XY2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.27■■□□□ 1.8
Pcdhga6Q91XY2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
Pcdhga6Q91XY2 Gm45855-201ENSMUST00000212546 880 ntBASIC26.25■■□□□ 1.79
Pcdhga6Q91XY2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhga6Q91XY2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdhga6Q91XY2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Pcdhga6Q91XY2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Pcdhga6Q91XY2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdhga6Q91XY2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdhga6Q91XY2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdhga6Q91XY2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.16■■□□□ 1.78
Pcdhga6Q91XY2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms