Protein–RNA interactions for Protein: Q8R4W6

Pcolce2, Procollagen C-endopeptidase enhancer 2, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcolce2Q8R4W6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.71■■■□□ 2.03
Pcolce2Q8R4W6 Gm27322-201ENSMUST00000184007 104 ntBASIC27.71■■■□□ 2.03
Pcolce2Q8R4W6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Pcolce2Q8R4W6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.66■■■□□ 2.02
Pcolce2Q8R4W6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
Pcolce2Q8R4W6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.59■■■□□ 2.01
Pcolce2Q8R4W6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.57■■■□□ 2
Pcolce2Q8R4W6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
Pcolce2Q8R4W6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.52■■■□□ 2
Pcolce2Q8R4W6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Pcolce2Q8R4W6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Pcolce2Q8R4W6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Pcolce2Q8R4W6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.47■■□□□ 1.99
Pcolce2Q8R4W6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pcolce2Q8R4W6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Pcolce2Q8R4W6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
Pcolce2Q8R4W6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Pcolce2Q8R4W6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.37■■□□□ 1.97
Pcolce2Q8R4W6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pcolce2Q8R4W6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pcolce2Q8R4W6 Zfp131-205ENSMUST00000223812 663 ntBASIC27.35■■□□□ 1.97
Pcolce2Q8R4W6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pcolce2Q8R4W6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Pcolce2Q8R4W6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pcolce2Q8R4W6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pcolce2Q8R4W6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Pcolce2Q8R4W6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Pcolce2Q8R4W6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Pcolce2Q8R4W6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Pcolce2Q8R4W6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.15■■□□□ 1.94
Pcolce2Q8R4W6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Pcolce2Q8R4W6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.13■■□□□ 1.93
Pcolce2Q8R4W6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.13■■□□□ 1.93
Pcolce2Q8R4W6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Pcolce2Q8R4W6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.12■■□□□ 1.93
Pcolce2Q8R4W6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Pcolce2Q8R4W6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pcolce2Q8R4W6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.07■■□□□ 1.92
Pcolce2Q8R4W6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Pcolce2Q8R4W6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Pcolce2Q8R4W6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Pcolce2Q8R4W6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Pcolce2Q8R4W6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Pcolce2Q8R4W6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Pcolce2Q8R4W6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Pcolce2Q8R4W6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pcolce2Q8R4W6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.96■■□□□ 1.91
Pcolce2Q8R4W6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Pcolce2Q8R4W6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Pcolce2Q8R4W6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Pcolce2Q8R4W6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Pcolce2Q8R4W6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Pcolce2Q8R4W6 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.84■■□□□ 1.89
Pcolce2Q8R4W6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
Pcolce2Q8R4W6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Pcolce2Q8R4W6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Pcolce2Q8R4W6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Pcolce2Q8R4W6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Pcolce2Q8R4W6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
Pcolce2Q8R4W6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pcolce2Q8R4W6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Pcolce2Q8R4W6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcolce2Q8R4W6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Pcolce2Q8R4W6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Pcolce2Q8R4W6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.62■■□□□ 1.85
Pcolce2Q8R4W6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Pcolce2Q8R4W6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.61■■□□□ 1.85
Pcolce2Q8R4W6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pcolce2Q8R4W6 Gm16148-201ENSMUST00000119653 893 ntBASIC26.56■■□□□ 1.84
Pcolce2Q8R4W6 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.56■■□□□ 1.84
Pcolce2Q8R4W6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcolce2Q8R4W6 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.55■■□□□ 1.84
Pcolce2Q8R4W6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Pcolce2Q8R4W6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Pcolce2Q8R4W6 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.52■■□□□ 1.84
Pcolce2Q8R4W6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcolce2Q8R4W6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Pcolce2Q8R4W6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.47■■□□□ 1.83
Pcolce2Q8R4W6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcolce2Q8R4W6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcolce2Q8R4W6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.45■■□□□ 1.82
Pcolce2Q8R4W6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
Pcolce2Q8R4W6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Pcolce2Q8R4W6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Pcolce2Q8R4W6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcolce2Q8R4W6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcolce2Q8R4W6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pcolce2Q8R4W6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pcolce2Q8R4W6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pcolce2Q8R4W6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Pcolce2Q8R4W6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.37■■□□□ 1.81
Pcolce2Q8R4W6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
Pcolce2Q8R4W6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.37■■□□□ 1.81
Pcolce2Q8R4W6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcolce2Q8R4W6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcolce2Q8R4W6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcolce2Q8R4W6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcolce2Q8R4W6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.33■■□□□ 1.81
Pcolce2Q8R4W6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcolce2Q8R4W6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 171.3 ms