Protein–RNA interactions for Protein: Q8R3K3

Ptcd2, Pentatricopeptide repeat-containing protein 2, mitochondrial, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd2Q8R3K3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
Ptcd2Q8R3K3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Ptcd2Q8R3K3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.79■■■□□ 2.52
Ptcd2Q8R3K3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ptcd2Q8R3K3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ptcd2Q8R3K3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.72■■■□□ 2.51
Ptcd2Q8R3K3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.7■■■□□ 2.5
Ptcd2Q8R3K3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ptcd2Q8R3K3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.61■■■□□ 2.49
Ptcd2Q8R3K3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Ptcd2Q8R3K3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Ptcd2Q8R3K3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Ptcd2Q8R3K3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.45■■■□□ 2.46
Ptcd2Q8R3K3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ptcd2Q8R3K3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.42■■■□□ 2.46
Ptcd2Q8R3K3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.45
Ptcd2Q8R3K3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.37■■■□□ 2.45
Ptcd2Q8R3K3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
Ptcd2Q8R3K3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.36■■■□□ 2.45
Ptcd2Q8R3K3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Ptcd2Q8R3K3 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.34■■■□□ 2.45
Ptcd2Q8R3K3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Ptcd2Q8R3K3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ptcd2Q8R3K3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Ptcd2Q8R3K3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Ptcd2Q8R3K3 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.19■■■□□ 2.42
Ptcd2Q8R3K3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
Ptcd2Q8R3K3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Ptcd2Q8R3K3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Ptcd2Q8R3K3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
Ptcd2Q8R3K3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ptcd2Q8R3K3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.11■■■□□ 2.41
Ptcd2Q8R3K3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.11■■■□□ 2.41
Ptcd2Q8R3K3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.09■■■□□ 2.41
Ptcd2Q8R3K3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ptcd2Q8R3K3 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.07■■■□□ 2.4
Ptcd2Q8R3K3 Gm16148-201ENSMUST00000119653 893 ntBASIC30.05■■■□□ 2.4
Ptcd2Q8R3K3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ptcd2Q8R3K3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30■■■□□ 2.39
Ptcd2Q8R3K3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30■■■□□ 2.39
Ptcd2Q8R3K3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
Ptcd2Q8R3K3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Ptcd2Q8R3K3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Ptcd2Q8R3K3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC29.88■■■□□ 2.37
Ptcd2Q8R3K3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
Ptcd2Q8R3K3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.87■■■□□ 2.37
Ptcd2Q8R3K3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Ptcd2Q8R3K3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.84■■■□□ 2.37
Ptcd2Q8R3K3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
Ptcd2Q8R3K3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Ptcd2Q8R3K3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC29.82■■■□□ 2.36
Ptcd2Q8R3K3 Gm45855-201ENSMUST00000212546 880 ntBASIC29.76■■■□□ 2.35
Ptcd2Q8R3K3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
Ptcd2Q8R3K3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ptcd2Q8R3K3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ptcd2Q8R3K3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ptcd2Q8R3K3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.73■■■□□ 2.35
Ptcd2Q8R3K3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Ptcd2Q8R3K3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ptcd2Q8R3K3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
Ptcd2Q8R3K3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Ptcd2Q8R3K3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ptcd2Q8R3K3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ptcd2Q8R3K3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Ptcd2Q8R3K3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Ptcd2Q8R3K3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ptcd2Q8R3K3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Ptcd2Q8R3K3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
Ptcd2Q8R3K3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Ptcd2Q8R3K3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ptcd2Q8R3K3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Ptcd2Q8R3K3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.32
Ptcd2Q8R3K3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.32
Ptcd2Q8R3K3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ptcd2Q8R3K3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC29.47■■■□□ 2.31
Ptcd2Q8R3K3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
Ptcd2Q8R3K3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
Ptcd2Q8R3K3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Ptcd2Q8R3K3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Ptcd2Q8R3K3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Ptcd2Q8R3K3 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.42■■■□□ 2.3
Ptcd2Q8R3K3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ptcd2Q8R3K3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ptcd2Q8R3K3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ptcd2Q8R3K3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ptcd2Q8R3K3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ptcd2Q8R3K3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Ptcd2Q8R3K3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ptcd2Q8R3K3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
Ptcd2Q8R3K3 Gm9397-201ENSMUST00000200125 605 ntBASIC29.3■■■□□ 2.28
Ptcd2Q8R3K3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ptcd2Q8R3K3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ptcd2Q8R3K3 Psd-208ENSMUST00000224556 2034 ntBASIC29.29■■■□□ 2.28
Ptcd2Q8R3K3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
Ptcd2Q8R3K3 Peli2-204ENSMUST00000226513 1320 ntBASIC29.28■■■□□ 2.28
Ptcd2Q8R3K3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29.28■■■□□ 2.28
Ptcd2Q8R3K3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Ptcd2Q8R3K3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ptcd2Q8R3K3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Ptcd2Q8R3K3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms