Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rfc3Q8R323 Gm8109-201ENSMUST00000194076 746 ntBASIC25.48■■□□□ 1.67
Rfc3Q8R323 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rfc3Q8R323 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rfc3Q8R323 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rfc3Q8R323 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Rfc3Q8R323 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.38■■□□□ 1.65
Rfc3Q8R323 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.38■■□□□ 1.65
Rfc3Q8R323 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rfc3Q8R323 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.35■■□□□ 1.65
Rfc3Q8R323 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Rfc3Q8R323 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.29■■□□□ 1.64
Rfc3Q8R323 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Rfc3Q8R323 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rfc3Q8R323 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rfc3Q8R323 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Rfc3Q8R323 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rfc3Q8R323 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.11■■□□□ 1.61
Rfc3Q8R323 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Rfc3Q8R323 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rfc3Q8R323 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.09■■□□□ 1.61
Rfc3Q8R323 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.05■■□□□ 1.6
Rfc3Q8R323 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rfc3Q8R323 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rfc3Q8R323 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
Rfc3Q8R323 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rfc3Q8R323 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rfc3Q8R323 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rfc3Q8R323 Gm27322-201ENSMUST00000184007 104 ntBASIC24.96■■□□□ 1.59
Rfc3Q8R323 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rfc3Q8R323 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rfc3Q8R323 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Rfc3Q8R323 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.92■■□□□ 1.58
Rfc3Q8R323 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rfc3Q8R323 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
Rfc3Q8R323 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Rfc3Q8R323 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rfc3Q8R323 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rfc3Q8R323 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rfc3Q8R323 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rfc3Q8R323 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Rfc3Q8R323 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.69■■□□□ 1.54
Rfc3Q8R323 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Rfc3Q8R323 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rfc3Q8R323 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.64■■□□□ 1.54
Rfc3Q8R323 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rfc3Q8R323 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rfc3Q8R323 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.62■■□□□ 1.53
Rfc3Q8R323 Gm24804-201ENSMUST00000174982 85 ntBASIC24.62■■□□□ 1.53
Rfc3Q8R323 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Rfc3Q8R323 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.59■■□□□ 1.53
Rfc3Q8R323 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Rfc3Q8R323 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rfc3Q8R323 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rfc3Q8R323 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rfc3Q8R323 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Rfc3Q8R323 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rfc3Q8R323 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rfc3Q8R323 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Rfc3Q8R323 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.47■■□□□ 1.51
Rfc3Q8R323 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.46■■□□□ 1.51
Rfc3Q8R323 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.45■■□□□ 1.5
Rfc3Q8R323 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rfc3Q8R323 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Rfc3Q8R323 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Rfc3Q8R323 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Rfc3Q8R323 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rfc3Q8R323 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rfc3Q8R323 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Rfc3Q8R323 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rfc3Q8R323 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rfc3Q8R323 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.31■■□□□ 1.48
Rfc3Q8R323 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rfc3Q8R323 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rfc3Q8R323 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rfc3Q8R323 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rfc3Q8R323 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.24■■□□□ 1.47
Rfc3Q8R323 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rfc3Q8R323 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Rfc3Q8R323 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Rfc3Q8R323 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rfc3Q8R323 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rfc3Q8R323 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rfc3Q8R323 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Rfc3Q8R323 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rfc3Q8R323 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rfc3Q8R323 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rfc3Q8R323 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rfc3Q8R323 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rfc3Q8R323 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Rfc3Q8R323 Mipep-204ENSMUST00000225043 1548 ntBASIC24.06■■□□□ 1.44
Rfc3Q8R323 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rfc3Q8R323 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rfc3Q8R323 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rfc3Q8R323 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.01■■□□□ 1.43
Rfc3Q8R323 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Rfc3Q8R323 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rfc3Q8R323 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.99■■□□□ 1.43
Rfc3Q8R323 Zfp131-205ENSMUST00000223812 663 ntBASIC23.99■■□□□ 1.43
Rfc3Q8R323 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms