Protein–RNA interactions for Protein: Q8R2A2

Vmn1r230, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r230Q8R2A2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vmn1r230Q8R2A2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vmn1r230Q8R2A2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vmn1r230Q8R2A2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vmn1r230Q8R2A2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r230Q8R2A2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Vmn1r230Q8R2A2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r230Q8R2A2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r230Q8R2A2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Vmn1r230Q8R2A2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.16■■□□□ 1.14
Vmn1r230Q8R2A2 Gm23366-201ENSMUST00000175022 89 ntBASIC22.12■■□□□ 1.13
Vmn1r230Q8R2A2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Vmn1r230Q8R2A2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vmn1r230Q8R2A2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vmn1r230Q8R2A2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Vmn1r230Q8R2A2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vmn1r230Q8R2A2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vmn1r230Q8R2A2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Vmn1r230Q8R2A2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vmn1r230Q8R2A2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vmn1r230Q8R2A2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.98■■□□□ 1.11
Vmn1r230Q8R2A2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vmn1r230Q8R2A2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vmn1r230Q8R2A2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Vmn1r230Q8R2A2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vmn1r230Q8R2A2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Vmn1r230Q8R2A2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vmn1r230Q8R2A2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vmn1r230Q8R2A2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vmn1r230Q8R2A2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.8■■□□□ 1.08
Vmn1r230Q8R2A2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Vmn1r230Q8R2A2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vmn1r230Q8R2A2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vmn1r230Q8R2A2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vmn1r230Q8R2A2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vmn1r230Q8R2A2 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.74■■□□□ 1.07
Vmn1r230Q8R2A2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vmn1r230Q8R2A2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vmn1r230Q8R2A2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vmn1r230Q8R2A2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.7■■□□□ 1.06
Vmn1r230Q8R2A2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Vmn1r230Q8R2A2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vmn1r230Q8R2A2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vmn1r230Q8R2A2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vmn1r230Q8R2A2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vmn1r230Q8R2A2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Vmn1r230Q8R2A2 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.63■■□□□ 1.05
Vmn1r230Q8R2A2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vmn1r230Q8R2A2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r230Q8R2A2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Vmn1r230Q8R2A2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r230Q8R2A2 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.58■■□□□ 1.05
Vmn1r230Q8R2A2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r230Q8R2A2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.56■■□□□ 1.04
Vmn1r230Q8R2A2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Vmn1r230Q8R2A2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vmn1r230Q8R2A2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Vmn1r230Q8R2A2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Vmn1r230Q8R2A2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vmn1r230Q8R2A2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Vmn1r230Q8R2A2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vmn1r230Q8R2A2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vmn1r230Q8R2A2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vmn1r230Q8R2A2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vmn1r230Q8R2A2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vmn1r230Q8R2A2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vmn1r230Q8R2A2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vmn1r230Q8R2A2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.44■■□□□ 1.02
Vmn1r230Q8R2A2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Vmn1r230Q8R2A2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
Vmn1r230Q8R2A2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vmn1r230Q8R2A2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Vmn1r230Q8R2A2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.39■■□□□ 1.01
Vmn1r230Q8R2A2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vmn1r230Q8R2A2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vmn1r230Q8R2A2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
Vmn1r230Q8R2A2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vmn1r230Q8R2A2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vmn1r230Q8R2A2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vmn1r230Q8R2A2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.34■■□□□ 1.01
Vmn1r230Q8R2A2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Vmn1r230Q8R2A2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Vmn1r230Q8R2A2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vmn1r230Q8R2A2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vmn1r230Q8R2A2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vmn1r230Q8R2A2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vmn1r230Q8R2A2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vmn1r230Q8R2A2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r230Q8R2A2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vmn1r230Q8R2A2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vmn1r230Q8R2A2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vmn1r230Q8R2A2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vmn1r230Q8R2A2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vmn1r230Q8R2A2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vmn1r230Q8R2A2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Vmn1r230Q8R2A2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Vmn1r230Q8R2A2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vmn1r230Q8R2A2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vmn1r230Q8R2A2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vmn1r230Q8R2A2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms