Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
Alms1Q8K4E0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Alms1Q8K4E0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.75■■■□□ 2.03
Alms1Q8K4E0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.74■■■□□ 2.03
Alms1Q8K4E0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.74■■■□□ 2.03
Alms1Q8K4E0 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.7■■■□□ 2.02
Alms1Q8K4E0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.69■■■□□ 2.02
Alms1Q8K4E0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Alms1Q8K4E0 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.69■■■□□ 2.02
Alms1Q8K4E0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Alms1Q8K4E0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Alms1Q8K4E0 Gm27322-201ENSMUST00000184007 104 ntBASIC27.63■■■□□ 2.01
Alms1Q8K4E0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Alms1Q8K4E0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Alms1Q8K4E0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.59■■■□□ 2.01
Alms1Q8K4E0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
Alms1Q8K4E0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.56■■■□□ 2
Alms1Q8K4E0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
Alms1Q8K4E0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.55■■■□□ 2
Alms1Q8K4E0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Alms1Q8K4E0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Alms1Q8K4E0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Alms1Q8K4E0 Zfp131-205ENSMUST00000223812 663 ntBASIC27.49■■□□□ 1.99
Alms1Q8K4E0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.44■■□□□ 1.98
Alms1Q8K4E0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Alms1Q8K4E0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Alms1Q8K4E0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Alms1Q8K4E0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Alms1Q8K4E0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Alms1Q8K4E0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Alms1Q8K4E0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Alms1Q8K4E0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Alms1Q8K4E0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Alms1Q8K4E0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Alms1Q8K4E0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Alms1Q8K4E0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Alms1Q8K4E0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Alms1Q8K4E0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Alms1Q8K4E0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Alms1Q8K4E0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.2■■□□□ 1.95
Alms1Q8K4E0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Alms1Q8K4E0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Alms1Q8K4E0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Alms1Q8K4E0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Alms1Q8K4E0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.15■■□□□ 1.94
Alms1Q8K4E0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Alms1Q8K4E0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Alms1Q8K4E0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.09■■□□□ 1.93
Alms1Q8K4E0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.07■■□□□ 1.92
Alms1Q8K4E0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Alms1Q8K4E0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Alms1Q8K4E0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27■■□□□ 1.91
Alms1Q8K4E0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Alms1Q8K4E0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Alms1Q8K4E0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Alms1Q8K4E0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Alms1Q8K4E0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Alms1Q8K4E0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.9■■□□□ 1.9
Alms1Q8K4E0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Alms1Q8K4E0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Alms1Q8K4E0 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.89■■□□□ 1.89
Alms1Q8K4E0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Alms1Q8K4E0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Alms1Q8K4E0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Alms1Q8K4E0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Alms1Q8K4E0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.78■■□□□ 1.88
Alms1Q8K4E0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Alms1Q8K4E0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
Alms1Q8K4E0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Alms1Q8K4E0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Alms1Q8K4E0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Alms1Q8K4E0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Alms1Q8K4E0 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.68■■□□□ 1.86
Alms1Q8K4E0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Alms1Q8K4E0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Alms1Q8K4E0 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.62■■□□□ 1.85
Alms1Q8K4E0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.62■■□□□ 1.85
Alms1Q8K4E0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Alms1Q8K4E0 Gm16148-201ENSMUST00000119653 893 ntBASIC26.59■■□□□ 1.85
Alms1Q8K4E0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Alms1Q8K4E0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
Alms1Q8K4E0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Alms1Q8K4E0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Alms1Q8K4E0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.5■■□□□ 1.83
Alms1Q8K4E0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Alms1Q8K4E0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Alms1Q8K4E0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Alms1Q8K4E0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Alms1Q8K4E0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Alms1Q8K4E0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Alms1Q8K4E0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.44■■□□□ 1.82
Alms1Q8K4E0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Alms1Q8K4E0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.43■■□□□ 1.82
Alms1Q8K4E0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Alms1Q8K4E0 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.4■■□□□ 1.82
Alms1Q8K4E0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Alms1Q8K4E0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Alms1Q8K4E0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Alms1Q8K4E0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Alms1Q8K4E0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms