Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.61■■■□□ 2.33
Trim61Q8JZK6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
Trim61Q8JZK6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Trim61Q8JZK6 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.58■■■□□ 2.33
Trim61Q8JZK6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Trim61Q8JZK6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Trim61Q8JZK6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Trim61Q8JZK6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.48■■■□□ 2.31
Trim61Q8JZK6 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.45■■■□□ 2.31
Trim61Q8JZK6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Trim61Q8JZK6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Trim61Q8JZK6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Trim61Q8JZK6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
Trim61Q8JZK6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.35■■■□□ 2.29
Trim61Q8JZK6 Gm27322-201ENSMUST00000184007 104 ntBASIC29.34■■■□□ 2.29
Trim61Q8JZK6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Trim61Q8JZK6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Trim61Q8JZK6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
Trim61Q8JZK6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Trim61Q8JZK6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.19■■■□□ 2.26
Trim61Q8JZK6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Trim61Q8JZK6 Gm24804-201ENSMUST00000174982 85 ntBASIC29.11■■■□□ 2.25
Trim61Q8JZK6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Trim61Q8JZK6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Trim61Q8JZK6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Trim61Q8JZK6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29■■■□□ 2.23
Trim61Q8JZK6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Trim61Q8JZK6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Trim61Q8JZK6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.95■■■□□ 2.23
Trim61Q8JZK6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.92■■■□□ 2.22
Trim61Q8JZK6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Trim61Q8JZK6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Trim61Q8JZK6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Trim61Q8JZK6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.86■■■□□ 2.21
Trim61Q8JZK6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Trim61Q8JZK6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Trim61Q8JZK6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Trim61Q8JZK6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.76■■■□□ 2.19
Trim61Q8JZK6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.75■■■□□ 2.19
Trim61Q8JZK6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Trim61Q8JZK6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Trim61Q8JZK6 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.7■■■□□ 2.18
Trim61Q8JZK6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Trim61Q8JZK6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.67■■■□□ 2.18
Trim61Q8JZK6 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.66■■■□□ 2.18
Trim61Q8JZK6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Trim61Q8JZK6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Trim61Q8JZK6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
Trim61Q8JZK6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Trim61Q8JZK6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Trim61Q8JZK6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Trim61Q8JZK6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Trim61Q8JZK6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Trim61Q8JZK6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Trim61Q8JZK6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Trim61Q8JZK6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Trim61Q8JZK6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Trim61Q8JZK6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Trim61Q8JZK6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Trim61Q8JZK6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.52■■■□□ 2.16
Trim61Q8JZK6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Trim61Q8JZK6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Trim61Q8JZK6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Trim61Q8JZK6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
Trim61Q8JZK6 Zfp131-205ENSMUST00000223812 663 ntBASIC28.43■■■□□ 2.14
Trim61Q8JZK6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Trim61Q8JZK6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Trim61Q8JZK6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Trim61Q8JZK6 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.32■■■□□ 2.12
Trim61Q8JZK6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Trim61Q8JZK6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Trim61Q8JZK6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Trim61Q8JZK6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Trim61Q8JZK6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
Trim61Q8JZK6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Trim61Q8JZK6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Trim61Q8JZK6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
Trim61Q8JZK6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Trim61Q8JZK6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Trim61Q8JZK6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Trim61Q8JZK6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Trim61Q8JZK6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.18■■■□□ 2.1
Trim61Q8JZK6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Trim61Q8JZK6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Trim61Q8JZK6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.1■■■□□ 2.09
Trim61Q8JZK6 Gm16148-201ENSMUST00000119653 893 ntBASIC28.09■■■□□ 2.09
Trim61Q8JZK6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Trim61Q8JZK6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Trim61Q8JZK6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
Trim61Q8JZK6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Trim61Q8JZK6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.03■■■□□ 2.08
Trim61Q8JZK6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Trim61Q8JZK6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Trim61Q8JZK6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Trim61Q8JZK6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28■■■□□ 2.07
Trim61Q8JZK6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Trim61Q8JZK6 Peli2-204ENSMUST00000226513 1320 ntBASIC27.99■■■□□ 2.07
Trim61Q8JZK6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
Trim61Q8JZK6 Mipep-204ENSMUST00000225043 1548 ntBASIC27.92■■■□□ 2.06
Trim61Q8JZK6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms