Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.61■■■□□ 2.17
Zc3h3Q8CHP0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.59■■■□□ 2.17
Zc3h3Q8CHP0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Zc3h3Q8CHP0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Zc3h3Q8CHP0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Zc3h3Q8CHP0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Zc3h3Q8CHP0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Zc3h3Q8CHP0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Zc3h3Q8CHP0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.43■■■□□ 2.14
Zc3h3Q8CHP0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.38■■■□□ 2.13
Zc3h3Q8CHP0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Zc3h3Q8CHP0 Psd-208ENSMUST00000224556 2034 ntBASIC28.33■■■□□ 2.13
Zc3h3Q8CHP0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Zc3h3Q8CHP0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Zc3h3Q8CHP0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.25■■■□□ 2.11
Zc3h3Q8CHP0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Zc3h3Q8CHP0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Zc3h3Q8CHP0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
Zc3h3Q8CHP0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Zc3h3Q8CHP0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Zc3h3Q8CHP0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Zc3h3Q8CHP0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Zc3h3Q8CHP0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Zc3h3Q8CHP0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.05■■■□□ 2.08
Zc3h3Q8CHP0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Zc3h3Q8CHP0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Zc3h3Q8CHP0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Zc3h3Q8CHP0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
Zc3h3Q8CHP0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Zc3h3Q8CHP0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Zc3h3Q8CHP0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.91■■■□□ 2.06
Zc3h3Q8CHP0 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.9■■■□□ 2.06
Zc3h3Q8CHP0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Zc3h3Q8CHP0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Zc3h3Q8CHP0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
Zc3h3Q8CHP0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.83■■■□□ 2.05
Zc3h3Q8CHP0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Zc3h3Q8CHP0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Zc3h3Q8CHP0 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.79■■■□□ 2.04
Zc3h3Q8CHP0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Zc3h3Q8CHP0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Zc3h3Q8CHP0 Gm16148-201ENSMUST00000119653 893 ntBASIC27.75■■■□□ 2.03
Zc3h3Q8CHP0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Zc3h3Q8CHP0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Zc3h3Q8CHP0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Zc3h3Q8CHP0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Zc3h3Q8CHP0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Zc3h3Q8CHP0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Zc3h3Q8CHP0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
Zc3h3Q8CHP0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.02
Zc3h3Q8CHP0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.6■■■□□ 2.01
Zc3h3Q8CHP0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Zc3h3Q8CHP0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Zc3h3Q8CHP0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.58■■■□□ 2.01
Zc3h3Q8CHP0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
Zc3h3Q8CHP0 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.56■■■□□ 2
Zc3h3Q8CHP0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.55■■■□□ 2
Zc3h3Q8CHP0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.55■■■□□ 2
Zc3h3Q8CHP0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
Zc3h3Q8CHP0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Zc3h3Q8CHP0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Zc3h3Q8CHP0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
Zc3h3Q8CHP0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Zc3h3Q8CHP0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.44■■□□□ 1.98
Zc3h3Q8CHP0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Zc3h3Q8CHP0 Gm45855-201ENSMUST00000212546 880 ntBASIC27.43■■□□□ 1.98
Zc3h3Q8CHP0 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.42■■□□□ 1.98
Zc3h3Q8CHP0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Zc3h3Q8CHP0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Zc3h3Q8CHP0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
Zc3h3Q8CHP0 Gm5987-201ENSMUST00000196433 1151 ntBASIC27.4■■□□□ 1.98
Zc3h3Q8CHP0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Zc3h3Q8CHP0 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.38■■□□□ 1.97
Zc3h3Q8CHP0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.37■■□□□ 1.97
Zc3h3Q8CHP0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.37■■□□□ 1.97
Zc3h3Q8CHP0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
Zc3h3Q8CHP0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Zc3h3Q8CHP0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Zc3h3Q8CHP0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Zc3h3Q8CHP0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Zc3h3Q8CHP0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Zc3h3Q8CHP0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Zc3h3Q8CHP0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Zc3h3Q8CHP0 Peli2-204ENSMUST00000226513 1320 ntBASIC27.23■■□□□ 1.95
Zc3h3Q8CHP0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Zc3h3Q8CHP0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Zc3h3Q8CHP0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Zc3h3Q8CHP0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Zc3h3Q8CHP0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Zc3h3Q8CHP0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC27.2■■□□□ 1.94
Zc3h3Q8CHP0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.19■■□□□ 1.94
Zc3h3Q8CHP0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Zc3h3Q8CHP0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Zc3h3Q8CHP0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.18■■□□□ 1.94
Zc3h3Q8CHP0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.15■■□□□ 1.94
Zc3h3Q8CHP0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Zc3h3Q8CHP0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Zc3h3Q8CHP0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Zc3h3Q8CHP0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Zc3h3Q8CHP0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms