Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34.76■■■■□ 3.16
Smc4Q8CG47 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
Smc4Q8CG47 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC34.75■■■■□ 3.15
Smc4Q8CG47 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Smc4Q8CG47 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
Smc4Q8CG47 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Smc4Q8CG47 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
Smc4Q8CG47 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
Smc4Q8CG47 Gm8109-201ENSMUST00000194076 746 ntBASIC34.6■■■■□ 3.13
Smc4Q8CG47 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
Smc4Q8CG47 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Smc4Q8CG47 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
Smc4Q8CG47 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Smc4Q8CG47 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Smc4Q8CG47 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC34.44■■■■□ 3.1
Smc4Q8CG47 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Smc4Q8CG47 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Smc4Q8CG47 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Smc4Q8CG47 Gm17082-201ENSMUST00000166043 1091 ntBASIC34.36■■■■□ 3.09
Smc4Q8CG47 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Smc4Q8CG47 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Smc4Q8CG47 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC34.28■■■■□ 3.08
Smc4Q8CG47 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC34.27■■■■□ 3.08
Smc4Q8CG47 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Smc4Q8CG47 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC34.22■■■■□ 3.07
Smc4Q8CG47 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC34.22■■■■□ 3.07
Smc4Q8CG47 Gm27322-201ENSMUST00000184007 104 ntBASIC34.21■■■■□ 3.07
Smc4Q8CG47 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC34.14■■■■□ 3.06
Smc4Q8CG47 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34.12■■■■□ 3.05
Smc4Q8CG47 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC34.06■■■■□ 3.04
Smc4Q8CG47 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC33.99■■■■□ 3.03
Smc4Q8CG47 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC33.95■■■■□ 3.02
Smc4Q8CG47 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Smc4Q8CG47 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC33.87■■■■□ 3.01
Smc4Q8CG47 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33.87■■■■□ 3.01
Smc4Q8CG47 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Smc4Q8CG47 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
Smc4Q8CG47 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC33.81■■■■□ 3
Smc4Q8CG47 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Smc4Q8CG47 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Smc4Q8CG47 AL845457.1-201ENSMUST00000197244 68 ntBASIC33.77■■■■□ 3
Smc4Q8CG47 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
Smc4Q8CG47 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
Smc4Q8CG47 Zfp131-207ENSMUST00000224946 1783 ntBASIC33.72■■■□□ 2.99
Smc4Q8CG47 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
Smc4Q8CG47 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.69■■■□□ 2.98
Smc4Q8CG47 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Smc4Q8CG47 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC33.66■■■□□ 2.98
Smc4Q8CG47 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
Smc4Q8CG47 AC166822.3-201ENSMUST00000227394 661 ntBASIC33.62■■■□□ 2.97
Smc4Q8CG47 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Smc4Q8CG47 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Smc4Q8CG47 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC33.59■■■□□ 2.97
Smc4Q8CG47 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC33.58■■■□□ 2.97
Smc4Q8CG47 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC33.56■■■□□ 2.96
Smc4Q8CG47 Gm24804-201ENSMUST00000174982 85 ntBASIC33.56■■■□□ 2.96
Smc4Q8CG47 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC33.55■■■□□ 2.96
Smc4Q8CG47 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Smc4Q8CG47 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC33.51■■■□□ 2.95
Smc4Q8CG47 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC33.47■■■□□ 2.95
Smc4Q8CG47 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Smc4Q8CG47 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
Smc4Q8CG47 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
Smc4Q8CG47 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
Smc4Q8CG47 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
Smc4Q8CG47 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
Smc4Q8CG47 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Smc4Q8CG47 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Smc4Q8CG47 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Smc4Q8CG47 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Smc4Q8CG47 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC33.16■■■□□ 2.9
Smc4Q8CG47 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Smc4Q8CG47 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Smc4Q8CG47 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Smc4Q8CG47 Mipep-204ENSMUST00000225043 1548 ntBASIC33.12■■■□□ 2.89
Smc4Q8CG47 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
Smc4Q8CG47 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Smc4Q8CG47 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
Smc4Q8CG47 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Smc4Q8CG47 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC33.05■■■□□ 2.88
Smc4Q8CG47 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Smc4Q8CG47 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Smc4Q8CG47 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Smc4Q8CG47 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Smc4Q8CG47 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC33■■■□□ 2.87
Smc4Q8CG47 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.98■■■□□ 2.87
Smc4Q8CG47 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
Smc4Q8CG47 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Smc4Q8CG47 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Smc4Q8CG47 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Smc4Q8CG47 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Smc4Q8CG47 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Smc4Q8CG47 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Smc4Q8CG47 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Smc4Q8CG47 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC32.87■■■□□ 2.85
Smc4Q8CG47 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC32.84■■■□□ 2.85
Smc4Q8CG47 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Smc4Q8CG47 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.83■■■□□ 2.85
Smc4Q8CG47 Peli2-204ENSMUST00000226513 1320 ntBASIC32.81■■■□□ 2.84
Smc4Q8CG47 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms