Protein–RNA interactions for Protein: Q8BHC1

Rab39b, Ras-related protein Rab-39B, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab39bQ8BHC1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rab39bQ8BHC1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.4■■□□□ 1.34
Rab39bQ8BHC1 Gm26115-201ENSMUST00000175605 87 ntBASIC23.36■■□□□ 1.33
Rab39bQ8BHC1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Rab39bQ8BHC1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rab39bQ8BHC1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rab39bQ8BHC1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rab39bQ8BHC1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rab39bQ8BHC1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.28■■□□□ 1.32
Rab39bQ8BHC1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rab39bQ8BHC1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.25■■□□□ 1.31
Rab39bQ8BHC1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.25■■□□□ 1.31
Rab39bQ8BHC1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rab39bQ8BHC1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rab39bQ8BHC1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rab39bQ8BHC1 Gm8109-201ENSMUST00000194076 746 ntBASIC23.17■■□□□ 1.3
Rab39bQ8BHC1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rab39bQ8BHC1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Rab39bQ8BHC1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rab39bQ8BHC1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.12■■□□□ 1.29
Rab39bQ8BHC1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rab39bQ8BHC1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.05■■□□□ 1.28
Rab39bQ8BHC1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rab39bQ8BHC1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Rab39bQ8BHC1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rab39bQ8BHC1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rab39bQ8BHC1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rab39bQ8BHC1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rab39bQ8BHC1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Rab39bQ8BHC1 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.94■■□□□ 1.26
Rab39bQ8BHC1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rab39bQ8BHC1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rab39bQ8BHC1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rab39bQ8BHC1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rab39bQ8BHC1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Rab39bQ8BHC1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rab39bQ8BHC1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rab39bQ8BHC1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Rab39bQ8BHC1 Gm27322-201ENSMUST00000184007 104 ntBASIC22.85■■□□□ 1.25
Rab39bQ8BHC1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.84■■□□□ 1.25
Rab39bQ8BHC1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Rab39bQ8BHC1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rab39bQ8BHC1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rab39bQ8BHC1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rab39bQ8BHC1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.75■■□□□ 1.23
Rab39bQ8BHC1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Rab39bQ8BHC1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Rab39bQ8BHC1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rab39bQ8BHC1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rab39bQ8BHC1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.63■■□□□ 1.21
Rab39bQ8BHC1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rab39bQ8BHC1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rab39bQ8BHC1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Rab39bQ8BHC1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rab39bQ8BHC1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Rab39bQ8BHC1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rab39bQ8BHC1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Rab39bQ8BHC1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rab39bQ8BHC1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rab39bQ8BHC1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rab39bQ8BHC1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rab39bQ8BHC1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rab39bQ8BHC1 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.45■■□□□ 1.18
Rab39bQ8BHC1 Gm24804-201ENSMUST00000174982 85 ntBASIC22.44■■□□□ 1.18
Rab39bQ8BHC1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rab39bQ8BHC1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Rab39bQ8BHC1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.43■■□□□ 1.18
Rab39bQ8BHC1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.42■■□□□ 1.18
Rab39bQ8BHC1 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.42■■□□□ 1.18
Rab39bQ8BHC1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rab39bQ8BHC1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rab39bQ8BHC1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rab39bQ8BHC1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rab39bQ8BHC1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.38■■□□□ 1.17
Rab39bQ8BHC1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rab39bQ8BHC1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rab39bQ8BHC1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rab39bQ8BHC1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rab39bQ8BHC1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Rab39bQ8BHC1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rab39bQ8BHC1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.34■■□□□ 1.17
Rab39bQ8BHC1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Rab39bQ8BHC1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.33■■□□□ 1.17
Rab39bQ8BHC1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.33■■□□□ 1.17
Rab39bQ8BHC1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rab39bQ8BHC1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rab39bQ8BHC1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rab39bQ8BHC1 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.27■■□□□ 1.16
Rab39bQ8BHC1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.26■■□□□ 1.15
Rab39bQ8BHC1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rab39bQ8BHC1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rab39bQ8BHC1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rab39bQ8BHC1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rab39bQ8BHC1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rab39bQ8BHC1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rab39bQ8BHC1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rab39bQ8BHC1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Rab39bQ8BHC1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rab39bQ8BHC1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rab39bQ8BHC1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms