Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Srsf1Q6PDM2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.92■■□□□ 1.58
Srsf1Q6PDM2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.91■■□□□ 1.58
Srsf1Q6PDM2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.89■■□□□ 1.58
Srsf1Q6PDM2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Srsf1Q6PDM2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Srsf1Q6PDM2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.87■■□□□ 1.57
Srsf1Q6PDM2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.86■■□□□ 1.57
Srsf1Q6PDM2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Srsf1Q6PDM2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Srsf1Q6PDM2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.84■■□□□ 1.57
Srsf1Q6PDM2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Srsf1Q6PDM2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.73■■□□□ 1.55
Srsf1Q6PDM2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.72■■□□□ 1.55
Srsf1Q6PDM2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Srsf1Q6PDM2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Srsf1Q6PDM2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Srsf1Q6PDM2 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.59■■□□□ 1.53
Srsf1Q6PDM2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Srsf1Q6PDM2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.56■■□□□ 1.52
Srsf1Q6PDM2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Srsf1Q6PDM2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Srsf1Q6PDM2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Srsf1Q6PDM2 Psd-208ENSMUST00000224556 2034 ntBASIC24.54■■□□□ 1.52
Srsf1Q6PDM2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Srsf1Q6PDM2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Srsf1Q6PDM2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Srsf1Q6PDM2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.5■■□□□ 1.51
Srsf1Q6PDM2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Srsf1Q6PDM2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Srsf1Q6PDM2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Srsf1Q6PDM2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Srsf1Q6PDM2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Srsf1Q6PDM2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Srsf1Q6PDM2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Srsf1Q6PDM2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Srsf1Q6PDM2 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.3■■□□□ 1.48
Srsf1Q6PDM2 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.29■■□□□ 1.48
Srsf1Q6PDM2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Srsf1Q6PDM2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.28■■□□□ 1.48
Srsf1Q6PDM2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Srsf1Q6PDM2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.26■■□□□ 1.47
Srsf1Q6PDM2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Srsf1Q6PDM2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Srsf1Q6PDM2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Srsf1Q6PDM2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Srsf1Q6PDM2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Srsf1Q6PDM2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Srsf1Q6PDM2 Gm16148-201ENSMUST00000119653 893 ntBASIC24.15■■□□□ 1.46
Srsf1Q6PDM2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Srsf1Q6PDM2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Srsf1Q6PDM2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Srsf1Q6PDM2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Srsf1Q6PDM2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Srsf1Q6PDM2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Srsf1Q6PDM2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Srsf1Q6PDM2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
Srsf1Q6PDM2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Srsf1Q6PDM2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Srsf1Q6PDM2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.02■■□□□ 1.44
Srsf1Q6PDM2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.02■■□□□ 1.44
Srsf1Q6PDM2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Srsf1Q6PDM2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Srsf1Q6PDM2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Srsf1Q6PDM2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Srsf1Q6PDM2 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.97■■□□□ 1.43
Srsf1Q6PDM2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Srsf1Q6PDM2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Srsf1Q6PDM2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Srsf1Q6PDM2 Gm45855-201ENSMUST00000212546 880 ntBASIC23.92■■□□□ 1.42
Srsf1Q6PDM2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.92■■□□□ 1.42
Srsf1Q6PDM2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Srsf1Q6PDM2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Srsf1Q6PDM2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Srsf1Q6PDM2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Srsf1Q6PDM2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Srsf1Q6PDM2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Srsf1Q6PDM2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Srsf1Q6PDM2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Srsf1Q6PDM2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Srsf1Q6PDM2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Srsf1Q6PDM2 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.82■■□□□ 1.4
Srsf1Q6PDM2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Srsf1Q6PDM2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
Srsf1Q6PDM2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Srsf1Q6PDM2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Srsf1Q6PDM2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Srsf1Q6PDM2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.76■■□□□ 1.39
Srsf1Q6PDM2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Srsf1Q6PDM2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Srsf1Q6PDM2 Peli2-204ENSMUST00000226513 1320 ntBASIC23.75■■□□□ 1.39
Srsf1Q6PDM2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Srsf1Q6PDM2 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.74■■□□□ 1.39
Srsf1Q6PDM2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Srsf1Q6PDM2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.68■■□□□ 1.38
Srsf1Q6PDM2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.67■■□□□ 1.38
Srsf1Q6PDM2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Srsf1Q6PDM2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Srsf1Q6PDM2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Srsf1Q6PDM2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms