Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Gm27322-201ENSMUST00000184007 104 ntBASIC30.72■■■□□ 2.51
Trim37Q6PCX9 Zfp131-205ENSMUST00000223812 663 ntBASIC30.68■■■□□ 2.5
Trim37Q6PCX9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Trim37Q6PCX9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Trim37Q6PCX9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Trim37Q6PCX9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Trim37Q6PCX9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Trim37Q6PCX9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Trim37Q6PCX9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.57■■■□□ 2.48
Trim37Q6PCX9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Trim37Q6PCX9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Trim37Q6PCX9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Trim37Q6PCX9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
Trim37Q6PCX9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Trim37Q6PCX9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Trim37Q6PCX9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.49■■■□□ 2.47
Trim37Q6PCX9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.48■■■□□ 2.47
Trim37Q6PCX9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Trim37Q6PCX9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Trim37Q6PCX9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.4■■■□□ 2.46
Trim37Q6PCX9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Trim37Q6PCX9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.45
Trim37Q6PCX9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.35■■■□□ 2.45
Trim37Q6PCX9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.33■■■□□ 2.45
Trim37Q6PCX9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.32■■■□□ 2.44
Trim37Q6PCX9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Trim37Q6PCX9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.31■■■□□ 2.44
Trim37Q6PCX9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Trim37Q6PCX9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Trim37Q6PCX9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Trim37Q6PCX9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.23■■■□□ 2.43
Trim37Q6PCX9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Trim37Q6PCX9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.2■■■□□ 2.43
Trim37Q6PCX9 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.2■■■□□ 2.43
Trim37Q6PCX9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.19■■■□□ 2.42
Trim37Q6PCX9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
Trim37Q6PCX9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Trim37Q6PCX9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Trim37Q6PCX9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Trim37Q6PCX9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Trim37Q6PCX9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Trim37Q6PCX9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Trim37Q6PCX9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
Trim37Q6PCX9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Trim37Q6PCX9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Trim37Q6PCX9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Trim37Q6PCX9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.91■■■□□ 2.38
Trim37Q6PCX9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.9■■■□□ 2.38
Trim37Q6PCX9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Trim37Q6PCX9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Trim37Q6PCX9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Trim37Q6PCX9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Trim37Q6PCX9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Trim37Q6PCX9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Trim37Q6PCX9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Trim37Q6PCX9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Trim37Q6PCX9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Trim37Q6PCX9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
Trim37Q6PCX9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
Trim37Q6PCX9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Trim37Q6PCX9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Trim37Q6PCX9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Trim37Q6PCX9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC29.75■■■□□ 2.35
Trim37Q6PCX9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
Trim37Q6PCX9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Trim37Q6PCX9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
Trim37Q6PCX9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.63■■■□□ 2.33
Trim37Q6PCX9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Trim37Q6PCX9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Trim37Q6PCX9 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.56■■■□□ 2.32
Trim37Q6PCX9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
Trim37Q6PCX9 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.55■■■□□ 2.32
Trim37Q6PCX9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Trim37Q6PCX9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Trim37Q6PCX9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Trim37Q6PCX9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Trim37Q6PCX9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Trim37Q6PCX9 Gm16148-201ENSMUST00000119653 893 ntBASIC29.46■■■□□ 2.31
Trim37Q6PCX9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Trim37Q6PCX9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Trim37Q6PCX9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Trim37Q6PCX9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Trim37Q6PCX9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Trim37Q6PCX9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC29.39■■■□□ 2.3
Trim37Q6PCX9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
Trim37Q6PCX9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Trim37Q6PCX9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Trim37Q6PCX9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Trim37Q6PCX9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
Trim37Q6PCX9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
Trim37Q6PCX9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Trim37Q6PCX9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Trim37Q6PCX9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Trim37Q6PCX9 Gm5987-201ENSMUST00000196433 1151 ntBASIC29.31■■■□□ 2.28
Trim37Q6PCX9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Trim37Q6PCX9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.28■■■□□ 2.28
Trim37Q6PCX9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Trim37Q6PCX9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Trim37Q6PCX9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
Trim37Q6PCX9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 168.2 ms