Protein–RNA interactions for Protein: Q61406

Cfhr1, Complement factor H-related 1, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfhr1Q61406 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cfhr1Q61406 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Cfhr1Q61406 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.91■■□□□ 1.58
Cfhr1Q61406 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cfhr1Q61406 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cfhr1Q61406 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Cfhr1Q61406 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Cfhr1Q61406 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Cfhr1Q61406 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.82■■□□□ 1.56
Cfhr1Q61406 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Cfhr1Q61406 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cfhr1Q61406 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Cfhr1Q61406 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cfhr1Q61406 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cfhr1Q61406 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cfhr1Q61406 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Cfhr1Q61406 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Cfhr1Q61406 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Cfhr1Q61406 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cfhr1Q61406 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.6■■□□□ 1.53
Cfhr1Q61406 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.59■■□□□ 1.53
Cfhr1Q61406 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Cfhr1Q61406 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.58■■□□□ 1.52
Cfhr1Q61406 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.55■■□□□ 1.52
Cfhr1Q61406 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cfhr1Q61406 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.55■■□□□ 1.52
Cfhr1Q61406 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cfhr1Q61406 Zfp131-205ENSMUST00000223812 663 ntBASIC24.49■■□□□ 1.51
Cfhr1Q61406 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cfhr1Q61406 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Cfhr1Q61406 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cfhr1Q61406 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cfhr1Q61406 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Cfhr1Q61406 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Cfhr1Q61406 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cfhr1Q61406 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.4■■□□□ 1.5
Cfhr1Q61406 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Cfhr1Q61406 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cfhr1Q61406 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cfhr1Q61406 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cfhr1Q61406 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.33■■□□□ 1.49
Cfhr1Q61406 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Cfhr1Q61406 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cfhr1Q61406 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cfhr1Q61406 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.26■■□□□ 1.47
Cfhr1Q61406 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Cfhr1Q61406 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cfhr1Q61406 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Cfhr1Q61406 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Cfhr1Q61406 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Cfhr1Q61406 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Cfhr1Q61406 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cfhr1Q61406 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.17■■□□□ 1.46
Cfhr1Q61406 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.17■■□□□ 1.46
Cfhr1Q61406 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.16■■□□□ 1.46
Cfhr1Q61406 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cfhr1Q61406 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cfhr1Q61406 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Cfhr1Q61406 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.11■■□□□ 1.45
Cfhr1Q61406 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Cfhr1Q61406 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cfhr1Q61406 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Cfhr1Q61406 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Cfhr1Q61406 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cfhr1Q61406 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Cfhr1Q61406 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cfhr1Q61406 Gm16148-201ENSMUST00000119653 893 ntBASIC23.96■■□□□ 1.43
Cfhr1Q61406 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Cfhr1Q61406 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.94■■□□□ 1.42
Cfhr1Q61406 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cfhr1Q61406 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cfhr1Q61406 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cfhr1Q61406 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Cfhr1Q61406 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cfhr1Q61406 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cfhr1Q61406 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.84■■□□□ 1.41
Cfhr1Q61406 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cfhr1Q61406 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Cfhr1Q61406 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.81■■□□□ 1.4
Cfhr1Q61406 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cfhr1Q61406 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cfhr1Q61406 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Cfhr1Q61406 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cfhr1Q61406 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cfhr1Q61406 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
Cfhr1Q61406 Peli2-204ENSMUST00000226513 1320 ntBASIC23.76■■□□□ 1.39
Cfhr1Q61406 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cfhr1Q61406 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Cfhr1Q61406 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Cfhr1Q61406 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cfhr1Q61406 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Cfhr1Q61406 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.72■■□□□ 1.39
Cfhr1Q61406 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cfhr1Q61406 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cfhr1Q61406 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cfhr1Q61406 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Cfhr1Q61406 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.7■■□□□ 1.38
Cfhr1Q61406 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Cfhr1Q61406 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Cfhr1Q61406 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.67■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms