Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Herc2Q4U2R1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Herc2Q4U2R1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.93■□□□□ 0.46
Herc2Q4U2R1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Herc2Q4U2R1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.9■□□□□ 0.46
Herc2Q4U2R1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Herc2Q4U2R1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.89■□□□□ 0.45
Herc2Q4U2R1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Herc2Q4U2R1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Herc2Q4U2R1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Herc2Q4U2R1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.85■□□□□ 0.45
Herc2Q4U2R1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Herc2Q4U2R1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Herc2Q4U2R1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Herc2Q4U2R1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Herc2Q4U2R1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Herc2Q4U2R1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.76■□□□□ 0.43
Herc2Q4U2R1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.73■□□□□ 0.43
Herc2Q4U2R1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Herc2Q4U2R1 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.73■□□□□ 0.43
Herc2Q4U2R1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Herc2Q4U2R1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Herc2Q4U2R1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Herc2Q4U2R1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.59■□□□□ 0.41
Herc2Q4U2R1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herc2Q4U2R1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Herc2Q4U2R1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Herc2Q4U2R1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Herc2Q4U2R1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Herc2Q4U2R1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc2Q4U2R1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Herc2Q4U2R1 Gm45855-201ENSMUST00000212546 880 ntBASIC17.51■□□□□ 0.39
Herc2Q4U2R1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Herc2Q4U2R1 Gm16148-201ENSMUST00000119653 893 ntBASIC17.5■□□□□ 0.39
Herc2Q4U2R1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.49■□□□□ 0.39
Herc2Q4U2R1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Herc2Q4U2R1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Herc2Q4U2R1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herc2Q4U2R1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.47■□□□□ 0.39
Herc2Q4U2R1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Herc2Q4U2R1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc2Q4U2R1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Herc2Q4U2R1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.45■□□□□ 0.38
Herc2Q4U2R1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Herc2Q4U2R1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Herc2Q4U2R1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Herc2Q4U2R1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC17.43■□□□□ 0.38
Herc2Q4U2R1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Herc2Q4U2R1 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.42■□□□□ 0.38
Herc2Q4U2R1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Herc2Q4U2R1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Herc2Q4U2R1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.4■□□□□ 0.38
Herc2Q4U2R1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Herc2Q4U2R1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Herc2Q4U2R1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Herc2Q4U2R1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Herc2Q4U2R1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Herc2Q4U2R1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Herc2Q4U2R1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.35■□□□□ 0.37
Herc2Q4U2R1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Herc2Q4U2R1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Herc2Q4U2R1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Herc2Q4U2R1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Herc2Q4U2R1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Herc2Q4U2R1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Herc2Q4U2R1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Herc2Q4U2R1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.3■□□□□ 0.36
Herc2Q4U2R1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.27■□□□□ 0.36
Herc2Q4U2R1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Herc2Q4U2R1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Herc2Q4U2R1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Herc2Q4U2R1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Herc2Q4U2R1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.23■□□□□ 0.35
Herc2Q4U2R1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Herc2Q4U2R1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Herc2Q4U2R1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Herc2Q4U2R1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Herc2Q4U2R1 Gm9397-201ENSMUST00000200125 605 ntBASIC17.2■□□□□ 0.34
Herc2Q4U2R1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Herc2Q4U2R1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Herc2Q4U2R1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.18■□□□□ 0.34
Herc2Q4U2R1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Herc2Q4U2R1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Herc2Q4U2R1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17.13■□□□□ 0.33
Herc2Q4U2R1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herc2Q4U2R1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Herc2Q4U2R1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herc2Q4U2R1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Herc2Q4U2R1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Herc2Q4U2R1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Herc2Q4U2R1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herc2Q4U2R1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herc2Q4U2R1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herc2Q4U2R1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.04■□□□□ 0.32
Herc2Q4U2R1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Herc2Q4U2R1 Gm8503-201ENSMUST00000118131 455 ntBASIC17.03■□□□□ 0.32
Herc2Q4U2R1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Herc2Q4U2R1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Herc2Q4U2R1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Herc2Q4U2R1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms