Protein–RNA interactions for Protein: Q3UH53

Sdk1, Protein sidekick-1, mousemouse

Predictions only

Length 2,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdk1Q3UH53 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Sdk1Q3UH53 Psd-208ENSMUST00000224556 2034 ntBASIC24.4■■□□□ 1.5
Sdk1Q3UH53 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.37■■□□□ 1.49
Sdk1Q3UH53 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sdk1Q3UH53 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Sdk1Q3UH53 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sdk1Q3UH53 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sdk1Q3UH53 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Sdk1Q3UH53 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Sdk1Q3UH53 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.26■■□□□ 1.47
Sdk1Q3UH53 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.24■■□□□ 1.47
Sdk1Q3UH53 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Sdk1Q3UH53 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.2■■□□□ 1.46
Sdk1Q3UH53 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sdk1Q3UH53 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Sdk1Q3UH53 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.15■■□□□ 1.46
Sdk1Q3UH53 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Sdk1Q3UH53 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Sdk1Q3UH53 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Sdk1Q3UH53 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sdk1Q3UH53 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24■■□□□ 1.43
Sdk1Q3UH53 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sdk1Q3UH53 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sdk1Q3UH53 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sdk1Q3UH53 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Sdk1Q3UH53 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Sdk1Q3UH53 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Sdk1Q3UH53 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Sdk1Q3UH53 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Sdk1Q3UH53 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Sdk1Q3UH53 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.91■■□□□ 1.42
Sdk1Q3UH53 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sdk1Q3UH53 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Sdk1Q3UH53 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.84■■□□□ 1.41
Sdk1Q3UH53 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Sdk1Q3UH53 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Sdk1Q3UH53 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sdk1Q3UH53 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Sdk1Q3UH53 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sdk1Q3UH53 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Sdk1Q3UH53 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.73■■□□□ 1.39
Sdk1Q3UH53 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.71■■□□□ 1.39
Sdk1Q3UH53 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Sdk1Q3UH53 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Sdk1Q3UH53 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Sdk1Q3UH53 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.69■■□□□ 1.38
Sdk1Q3UH53 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sdk1Q3UH53 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.66■■□□□ 1.38
Sdk1Q3UH53 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sdk1Q3UH53 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sdk1Q3UH53 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sdk1Q3UH53 Gm16148-201ENSMUST00000119653 893 ntBASIC23.62■■□□□ 1.37
Sdk1Q3UH53 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.62■■□□□ 1.37
Sdk1Q3UH53 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Sdk1Q3UH53 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sdk1Q3UH53 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sdk1Q3UH53 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Sdk1Q3UH53 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.54■■□□□ 1.36
Sdk1Q3UH53 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sdk1Q3UH53 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sdk1Q3UH53 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sdk1Q3UH53 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.52■■□□□ 1.36
Sdk1Q3UH53 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Sdk1Q3UH53 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Sdk1Q3UH53 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.5■■□□□ 1.35
Sdk1Q3UH53 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Sdk1Q3UH53 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.48■■□□□ 1.35
Sdk1Q3UH53 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Sdk1Q3UH53 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
Sdk1Q3UH53 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Sdk1Q3UH53 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Sdk1Q3UH53 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sdk1Q3UH53 Gm45855-201ENSMUST00000212546 880 ntBASIC23.41■■□□□ 1.34
Sdk1Q3UH53 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
Sdk1Q3UH53 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sdk1Q3UH53 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Sdk1Q3UH53 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sdk1Q3UH53 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sdk1Q3UH53 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.37■■□□□ 1.33
Sdk1Q3UH53 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.37■■□□□ 1.33
Sdk1Q3UH53 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.35■■□□□ 1.33
Sdk1Q3UH53 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sdk1Q3UH53 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.34■■□□□ 1.33
Sdk1Q3UH53 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sdk1Q3UH53 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sdk1Q3UH53 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Sdk1Q3UH53 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sdk1Q3UH53 Peli2-204ENSMUST00000226513 1320 ntBASIC23.29■■□□□ 1.32
Sdk1Q3UH53 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sdk1Q3UH53 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Sdk1Q3UH53 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sdk1Q3UH53 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sdk1Q3UH53 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Sdk1Q3UH53 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sdk1Q3UH53 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.21■■□□□ 1.31
Sdk1Q3UH53 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sdk1Q3UH53 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Sdk1Q3UH53 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Sdk1Q3UH53 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sdk1Q3UH53 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 8 ms