Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Col5a2Q3U962 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC34.52■■■■□ 3.12
Col5a2Q3U962 Zfp131-205ENSMUST00000223812 663 ntBASIC34.5■■■■□ 3.11
Col5a2Q3U962 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC34.49■■■■□ 3.11
Col5a2Q3U962 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.48■■■■□ 3.11
Col5a2Q3U962 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.48■■■■□ 3.11
Col5a2Q3U962 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Col5a2Q3U962 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
Col5a2Q3U962 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Col5a2Q3U962 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Col5a2Q3U962 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC34.33■■■■□ 3.09
Col5a2Q3U962 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Col5a2Q3U962 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
Col5a2Q3U962 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Col5a2Q3U962 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.21■■■■□ 3.07
Col5a2Q3U962 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Col5a2Q3U962 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Col5a2Q3U962 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC34.14■■■■□ 3.06
Col5a2Q3U962 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Col5a2Q3U962 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
Col5a2Q3U962 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC34.08■■■■□ 3.05
Col5a2Q3U962 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC34.07■■■■□ 3.05
Col5a2Q3U962 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Col5a2Q3U962 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC34■■■■□ 3.03
Col5a2Q3U962 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
Col5a2Q3U962 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC33.98■■■■□ 3.03
Col5a2Q3U962 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Col5a2Q3U962 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Col5a2Q3U962 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC33.92■■■■□ 3.02
Col5a2Q3U962 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Col5a2Q3U962 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
Col5a2Q3U962 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
Col5a2Q3U962 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
Col5a2Q3U962 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC33.9■■■■□ 3.02
Col5a2Q3U962 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Col5a2Q3U962 AC166822.3-201ENSMUST00000227394 661 ntBASIC33.87■■■■□ 3.01
Col5a2Q3U962 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
Col5a2Q3U962 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
Col5a2Q3U962 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC33.76■■■□□ 2.99
Col5a2Q3U962 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC33.74■■■□□ 2.99
Col5a2Q3U962 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
Col5a2Q3U962 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Col5a2Q3U962 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.71■■■□□ 2.99
Col5a2Q3U962 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
Col5a2Q3U962 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.65■■■□□ 2.98
Col5a2Q3U962 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
Col5a2Q3U962 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC33.58■■■□□ 2.97
Col5a2Q3U962 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.56■■■□□ 2.96
Col5a2Q3U962 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
Col5a2Q3U962 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Col5a2Q3U962 AL845457.1-201ENSMUST00000197244 68 ntBASIC33.5■■■□□ 2.95
Col5a2Q3U962 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33.49■■■□□ 2.95
Col5a2Q3U962 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC33.48■■■□□ 2.95
Col5a2Q3U962 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
Col5a2Q3U962 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC33.45■■■□□ 2.94
Col5a2Q3U962 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Col5a2Q3U962 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
Col5a2Q3U962 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Col5a2Q3U962 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Col5a2Q3U962 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC33.4■■■□□ 2.94
Col5a2Q3U962 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Col5a2Q3U962 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC33.31■■■□□ 2.92
Col5a2Q3U962 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC33.3■■■□□ 2.92
Col5a2Q3U962 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Col5a2Q3U962 Gm16148-201ENSMUST00000119653 893 ntBASIC33.29■■■□□ 2.92
Col5a2Q3U962 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
Col5a2Q3U962 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Col5a2Q3U962 Tdp2-203ENSMUST00000223804 1136 ntBASIC33.27■■■□□ 2.92
Col5a2Q3U962 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC33.25■■■□□ 2.91
Col5a2Q3U962 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC33.23■■■□□ 2.91
Col5a2Q3U962 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.21■■■□□ 2.91
Col5a2Q3U962 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC33.18■■■□□ 2.9
Col5a2Q3U962 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
Col5a2Q3U962 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.16■■■□□ 2.9
Col5a2Q3U962 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Col5a2Q3U962 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Col5a2Q3U962 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC33.13■■■□□ 2.89
Col5a2Q3U962 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC33.05■■■□□ 2.88
Col5a2Q3U962 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC33.02■■■□□ 2.88
Col5a2Q3U962 Peli2-204ENSMUST00000226513 1320 ntBASIC33.01■■■□□ 2.88
Col5a2Q3U962 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC33.01■■■□□ 2.88
Col5a2Q3U962 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC33■■■□□ 2.87
Col5a2Q3U962 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
Col5a2Q3U962 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC32.99■■■□□ 2.87
Col5a2Q3U962 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Col5a2Q3U962 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.97■■■□□ 2.87
Col5a2Q3U962 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC32.96■■■□□ 2.87
Col5a2Q3U962 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
Col5a2Q3U962 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Col5a2Q3U962 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
Col5a2Q3U962 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.89■■■□□ 2.86
Col5a2Q3U962 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC32.86■■■□□ 2.85
Col5a2Q3U962 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC32.82■■■□□ 2.85
Col5a2Q3U962 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Col5a2Q3U962 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Col5a2Q3U962 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
Col5a2Q3U962 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.79■■■□□ 2.84
Col5a2Q3U962 Gm45855-201ENSMUST00000212546 880 ntBASIC32.79■■■□□ 2.84
Col5a2Q3U962 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC32.78■■■□□ 2.84
Col5a2Q3U962 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms