Protein–RNA interactions for Protein: Q08964

YPL216W, Putative ISWI chromatin-remodeling complex subunit YPL216W, yeastyeast

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPL216WQ08964 YLR281CYLR281C 468 nt13.46□□□□□ -0.25
YPL216WQ08964 TIR4YOR009W 1464 nt13.46□□□□□ -0.25
YPL216WQ08964 GFD2YCL036W 1701 nt13.44□□□□□ -0.26
YPL216WQ08964 YDL221WYDL221W 552 nt13.42□□□□□ -0.26
YPL216WQ08964 YLR154C-GYLR154C-G 150 nt13.42□□□□□ -0.26
YPL216WQ08964 WHI5YOR083W 888 nt13.41□□□□□ -0.26
YPL216WQ08964 IRC15YPL017C 1500 nt13.39□□□□□ -0.27
YPL216WQ08964 YCH1YGR203W 447 nt13.38□□□□□ -0.27
YPL216WQ08964 tM(CAU)CtM(CAU)C 72 nt13.36□□□□□ -0.27
YPL216WQ08964 IMT4tM(CAU)E 72 nt13.36□□□□□ -0.27
YPL216WQ08964 IMT3tM(CAU)J3 72 nt13.36□□□□□ -0.27
YPL216WQ08964 IMT1tM(CAU)O1 72 nt13.36□□□□□ -0.27
YPL216WQ08964 IMT2tM(CAU)P 72 nt13.36□□□□□ -0.27
YPL216WQ08964 PET9YBL030C 957 nt13.34□□□□□ -0.27
YPL216WQ08964 YBR220CYBR220C 1683 nt13.33□□□□□ -0.28
YPL216WQ08964 BDF1YLR399C 2061 nt13.29□□□□□ -0.28
YPL216WQ08964 SDH1YKL148C 1923 nt13.27□□□□□ -0.28
YPL216WQ08964 GIS3YLR094C 1509 nt13.26□□□□□ -0.29
YPL216WQ08964 YMR090WYMR090W 684 nt13.26□□□□□ -0.29
YPL216WQ08964 RTS2YOR077W 699 nt13.26□□□□□ -0.29
YPL216WQ08964 YMR057CYMR057C 372 nt13.25□□□□□ -0.29
YPL216WQ08964 PUS2YGL063W 1113 nt13.23□□□□□ -0.29
YPL216WQ08964 YJL152WYJL152W 360 nt13.23□□□□□ -0.29
YPL216WQ08964 YPR011CYPR011C 981 nt13.21□□□□□ -0.29
YPL216WQ08964 YLR236CYLR236C 324 nt13.19□□□□□ -0.3
YPL216WQ08964 FPS1YLL043W 2010 nt13.18□□□□□ -0.3
YPL216WQ08964 SCC4YER147C 1875 nt13.16□□□□□ -0.3
YPL216WQ08964 CUE1YMR264W 612 nt13.12□□□□□ -0.31
YPL216WQ08964 TAT1YBR069C 1860 nt13.1□□□□□ -0.31
YPL216WQ08964 DSK2YMR276W 1122 nt13.1□□□□□ -0.31
YPL216WQ08964 IMP2'YIL154C 1041 nt13.02□□□□□ -0.33
YPL216WQ08964 IDH1YNL037C 1083 nt13□□□□□ -0.33
YPL216WQ08964 YCL048W-AYCL048W-A 240 nt13□□□□□ -0.33
YPL216WQ08964 RRD1YIL153W 1182 nt12.94□□□□□ -0.34
YPL216WQ08964 GBP2YCL011C 1284 nt12.94□□□□□ -0.34
YPL216WQ08964 DED1YOR204W 1815 nt12.92□□□□□ -0.34
YPL216WQ08964 FMP45YDL222C 930 nt12.92□□□□□ -0.34
YPL216WQ08964 LPX1YOR084W 1164 nt12.92□□□□□ -0.34
YPL216WQ08964 ERV46YAL042W 1248 nt12.9□□□□□ -0.34
YPL216WQ08964 YHL050CYHL050C 2094 nt12.88□□□□□ -0.35
YPL216WQ08964 YSC84YHR016C 1407 nt12.87□□□□□ -0.35
YPL216WQ08964 YIL100WYIL100W 354 nt12.86□□□□□ -0.35
YPL216WQ08964 MXR2YCL033C 507 nt12.86□□□□□ -0.35
YPL216WQ08964 RRT12YCR045C 1476 nt12.85□□□□□ -0.35
YPL216WQ08964 YDR433WYDR433W 441 nt12.83□□□□□ -0.36
YPL216WQ08964 FMT1YBL013W 1206 nt12.81□□□□□ -0.36
YPL216WQ08964 TCD2YKL027W 1344 nt12.79□□□□□ -0.36
YPL216WQ08964 MOT3YMR070W 1473 nt12.77□□□□□ -0.37
YPL216WQ08964 YKR040CYKR040C 504 nt12.75□□□□□ -0.37
YPL216WQ08964 PCH2YBR186W 1695 nt12.75□□□□□ -0.37
YPL216WQ08964 SEC11YIR022W 504 nt12.74□□□□□ -0.37
YPL216WQ08964 GUT2YIL155C 1950 nt12.72□□□□□ -0.37
YPL216WQ08964 SPP1YPL138C 1062 nt12.68□□□□□ -0.38
YPL216WQ08964 FRD1YEL047C 1413 nt12.68□□□□□ -0.38
YPL216WQ08964 FMP52YER004W 696 nt12.67□□□□□ -0.38
YPL216WQ08964 PIB2YGL023C 1908 nt12.66□□□□□ -0.38
YPL216WQ08964 SOR2YDL246C 1074 nt12.66□□□□□ -0.38
YPL216WQ08964 SOR1YJR159W 1074 nt12.66□□□□□ -0.38
YPL216WQ08964 YNL195CYNL195C 786 nt12.65□□□□□ -0.38
YPL216WQ08964 ADH2YMR303C 1047 nt12.6□□□□□ -0.39
YPL216WQ08964 PCM1YEL058W 1674 nt12.58□□□□□ -0.4
YPL216WQ08964 NCP1YHR042W 2076 nt12.57□□□□□ -0.4
YPL216WQ08964 CWP1YKL096W 720 nt12.56□□□□□ -0.4
YPL216WQ08964 LCB1YMR296C 1677 nt12.53□□□□□ -0.4
YPL216WQ08964 YCL042WYCL042W 360 nt12.5□□□□□ -0.41
YPL216WQ08964 RTF1YGL244W 1677 nt12.47□□□□□ -0.41
YPL216WQ08964 SNF6YHL025W 999 nt12.44□□□□□ -0.42
YPL216WQ08964 BIO4YNR057C 714 nt12.41□□□□□ -0.42
YPL216WQ08964 RTG1YOL067C 534 nt12.4□□□□□ -0.42
YPL216WQ08964 BOP3YNL042W 1191 nt12.39□□□□□ -0.43
YPL216WQ08964 YIH1YCR059C 777 nt12.38□□□□□ -0.43
YPL216WQ08964 PTH1YHR189W 573 nt12.37□□□□□ -0.43
YPL216WQ08964 PTK1YKL198C 1989 nt12.37□□□□□ -0.43
YPL216WQ08964 SIM1YIL123W 1431 nt12.37□□□□□ -0.43
YPL216WQ08964 RNQ1YCL028W 1218 nt12.34□□□□□ -0.43
YPL216WQ08964 DIC1YLR348C 897 nt12.32□□□□□ -0.44
YPL216WQ08964 LYS4YDR234W 2082 nt12.3□□□□□ -0.44
YPL216WQ08964 YLL053CYLL053C 459 nt12.27□□□□□ -0.45
YPL216WQ08964 YLR235CYLR235C 399 nt12.25□□□□□ -0.45
YPL216WQ08964 YEL076C-AYEL076C-A 651 nt12.22□□□□□ -0.45
YPL216WQ08964 YEL076CYEL076C 651 nt12.22□□□□□ -0.45
YPL216WQ08964 YLR464WYLR464W 651 nt12.22□□□□□ -0.45
YPL216WQ08964 FTR1YER145C 1215 nt12.19□□□□□ -0.46
YPL216WQ08964 MRPL8YJL063C 717 nt12.19□□□□□ -0.46
YPL216WQ08964 YKL030WYKL030W 606 nt12.19□□□□□ -0.46
YPL216WQ08964 CRR1YLR213C 1269 nt12.19□□□□□ -0.46
YPL216WQ08964 TIM23YNR017W 669 nt12.17□□□□□ -0.46
YPL216WQ08964 ATF2YGR177C 1608 nt12.17□□□□□ -0.46
YPL216WQ08964 GAL1YBR020W 1587 nt12.16□□□□□ -0.46
YPL216WQ08964 ERF2YLR246W 1080 nt12.14□□□□□ -0.47
YPL216WQ08964 WSC2YNL283C 1512 nt12.13□□□□□ -0.47
YPL216WQ08964 TRM5YHR070W 1500 nt12.11□□□□□ -0.47
YPL216WQ08964 YLR179CYLR179C 606 nt12.09□□□□□ -0.47
YPL216WQ08964 MIC10YCL057C-A 294 nt12.07□□□□□ -0.48
YPL216WQ08964 AHT1YHR093W 549 nt12.06□□□□□ -0.48
YPL216WQ08964 AQY1YPR192W 918 nt12.03□□□□□ -0.48
YPL216WQ08964 SNG1YGR197C 1644 nt12.03□□□□□ -0.48
YPL216WQ08964 YFL054CYFL054C 1941 nt12.03□□□□□ -0.48
YPL216WQ08964 ADO1YJR105W 1023 nt12.02□□□□□ -0.49
YPL216WQ08964 YFL067WYFL067W 528 nt12.01□□□□□ -0.49
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms