Protein–RNA interactions for Protein: Q08723

RPN8, 26S proteasome regulatory subunit RPN8, yeastyeast

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN8Q08723 PHO4YFR034C 939 nt12.16□□□□□ -0.46
RPN8Q08723 FUN26YAL022C 1554 nt12.16□□□□□ -0.46
RPN8Q08723 YPS1YLR120C 1710 nt12.14□□□□□ -0.47
RPN8Q08723 CCT6YDR188W 1641 nt12.11□□□□□ -0.47
RPN8Q08723 DSK2YMR276W 1122 nt12.11□□□□□ -0.47
RPN8Q08723 EMI2YDR516C 1503 nt12.09□□□□□ -0.47
RPN8Q08723 SUF2tP(AGG)C 72 nt12.08□□□□□ -0.48
RPN8Q08723 SUF10tP(AGG)N 72 nt12.08□□□□□ -0.48
RPN8Q08723 YLR154C-GYLR154C-G 150 nt12.04□□□□□ -0.48
RPN8Q08723 FMP45YDL222C 930 nt12.03□□□□□ -0.48
RPN8Q08723 MRPL8YJL063C 717 nt12.01□□□□□ -0.49
RPN8Q08723 YCH1YGR203W 447 nt12□□□□□ -0.49
RPN8Q08723 YHR165W-AYHR165W-A 312 nt11.99□□□□□ -0.49
RPN8Q08723 ALF1YNL148C 765 nt11.99□□□□□ -0.49
RPN8Q08723 YMR090WYMR090W 684 nt11.98□□□□□ -0.49
RPN8Q08723 SDH1YKL148C 1923 nt11.96□□□□□ -0.5
RPN8Q08723 YDL221WYDL221W 552 nt11.94□□□□□ -0.5
RPN8Q08723 YDR095CYDR095C 411 nt11.93□□□□□ -0.5
RPN8Q08723 PCH2YBR186W 1695 nt11.93□□□□□ -0.5
RPN8Q08723 GUT2YIL155C 1950 nt11.92□□□□□ -0.5
RPN8Q08723 YLR236CYLR236C 324 nt11.9□□□□□ -0.5
RPN8Q08723 YPR011CYPR011C 981 nt11.87□□□□□ -0.51
RPN8Q08723 CAC2YML102W 1407 nt11.86□□□□□ -0.51
RPN8Q08723 ADO1YJR105W 1023 nt11.84□□□□□ -0.51
RPN8Q08723 YJL152WYJL152W 360 nt11.83□□□□□ -0.52
RPN8Q08723 IDH1YNL037C 1083 nt11.83□□□□□ -0.52
RPN8Q08723 PTP1YDL230W 1008 nt11.81□□□□□ -0.52
RPN8Q08723 SEC11YIR022W 504 nt11.8□□□□□ -0.52
RPN8Q08723 PIB2YGL023C 1908 nt11.8□□□□□ -0.52
RPN8Q08723 ERV46YAL042W 1248 nt11.79□□□□□ -0.52
RPN8Q08723 SCC4YER147C 1875 nt11.74□□□□□ -0.53
RPN8Q08723 SIS1YNL007C 1059 nt11.74□□□□□ -0.53
RPN8Q08723 YEL076C-AYEL076C-A 651 nt11.7□□□□□ -0.54
RPN8Q08723 YEL076CYEL076C 651 nt11.7□□□□□ -0.54
RPN8Q08723 YLR464WYLR464W 651 nt11.7□□□□□ -0.54
RPN8Q08723 LPX1YOR084W 1164 nt11.7□□□□□ -0.54
RPN8Q08723 IRC15YPL017C 1500 nt11.69□□□□□ -0.54
RPN8Q08723 RPP2AYOL039W 321 nt11.68□□□□□ -0.54
RPN8Q08723 YDR433WYDR433W 441 nt11.66□□□□□ -0.54
RPN8Q08723 YKR040CYKR040C 504 nt11.66□□□□□ -0.54
RPN8Q08723 GIS3YLR094C 1509 nt11.6□□□□□ -0.55
RPN8Q08723 GBP2YCL011C 1284 nt11.6□□□□□ -0.55
RPN8Q08723 YSC84YHR016C 1407 nt11.59□□□□□ -0.55
RPN8Q08723 TIR4YOR009W 1464 nt11.57□□□□□ -0.56
RPN8Q08723 RTG1YOL067C 534 nt11.56□□□□□ -0.56
RPN8Q08723 RTF1YGL244W 1677 nt11.55□□□□□ -0.56
RPN8Q08723 YHL050CYHL050C 2094 nt11.55□□□□□ -0.56
RPN8Q08723 FPS1YLL043W 2010 nt11.54□□□□□ -0.56
RPN8Q08723 SPP1YPL138C 1062 nt11.53□□□□□ -0.56
RPN8Q08723 PET9YBL030C 957 nt11.52□□□□□ -0.57
RPN8Q08723 YCL048W-AYCL048W-A 240 nt11.52□□□□□ -0.57
RPN8Q08723 HUA1YGR268C 597 nt11.49□□□□□ -0.57
RPN8Q08723 TCD2YKL027W 1344 nt11.47□□□□□ -0.57
RPN8Q08723 PTK1YKL198C 1989 nt11.45□□□□□ -0.58
RPN8Q08723 ART5YGR068C 1761 nt11.44□□□□□ -0.58
RPN8Q08723 UBX6YJL048C 1191 nt11.44□□□□□ -0.58
RPN8Q08723 MXR2YCL033C 507 nt11.41□□□□□ -0.58
RPN8Q08723 YMR057CYMR057C 372 nt11.4□□□□□ -0.58
RPN8Q08723 RRT12YCR045C 1476 nt11.38□□□□□ -0.59
RPN8Q08723 GFD2YCL036W 1701 nt11.38□□□□□ -0.59
RPN8Q08723 UME6YDR207C 2511 nt11.38□□□□□ -0.59
RPN8Q08723 BOP3YNL042W 1191 nt11.37□□□□□ -0.59
RPN8Q08723 YDR094WYDR094W 336 nt11.36□□□□□ -0.59
RPN8Q08723 RTS2YOR077W 699 nt11.33□□□□□ -0.6
RPN8Q08723 YCL042WYCL042W 360 nt11.27□□□□□ -0.61
RPN8Q08723 YLR235CYLR235C 399 nt11.26□□□□□ -0.61
RPN8Q08723 FRD1YEL047C 1413 nt11.26□□□□□ -0.61
RPN8Q08723 BOR1YNL275W 1731 nt11.23□□□□□ -0.61
RPN8Q08723 YKL030WYKL030W 606 nt11.23□□□□□ -0.61
RPN8Q08723 NCP1YHR042W 2076 nt11.22□□□□□ -0.61
RPN8Q08723 CUE1YMR264W 612 nt11.22□□□□□ -0.61
RPN8Q08723 DED1YOR204W 1815 nt11.22□□□□□ -0.61
RPN8Q08723 SOR2YDL246C 1074 nt11.2□□□□□ -0.62
RPN8Q08723 RRD1YIL153W 1182 nt11.2□□□□□ -0.62
RPN8Q08723 SOR1YJR159W 1074 nt11.2□□□□□ -0.62
RPN8Q08723 RDN37-1RDN37-1 5354 nt11.18□□□□□ -0.62
RPN8Q08723 RDN37-2RDN37-2 5354 nt11.18□□□□□ -0.62
RPN8Q08723 FMP52YER004W 696 nt11.16□□□□□ -0.62
RPN8Q08723 YNL195CYNL195C 786 nt11.13□□□□□ -0.63
RPN8Q08723 PTH1YHR189W 573 nt11.12□□□□□ -0.63
RPN8Q08723 YFL015W-AYFL015W-A 318 nt11.11□□□□□ -0.63
RPN8Q08723 YFL054CYFL054C 1941 nt11.11□□□□□ -0.63
RPN8Q08723 SPT8YLR055C 1809 nt11.1□□□□□ -0.63
RPN8Q08723 YJL225CYJL225C 5277 nt11.07□□□□□ -0.64
RPN8Q08723 LCB1YMR296C 1677 nt11.05□□□□□ -0.64
RPN8Q08723 YIL100WYIL100W 354 nt11.04□□□□□ -0.64
RPN8Q08723 FMT1YBL013W 1206 nt11.04□□□□□ -0.64
RPN8Q08723 tL(GAG)GtL(GAG)G 82 nt11.01□□□□□ -0.65
RPN8Q08723 CWP1YKL096W 720 nt10.98□□□□□ -0.65
RPN8Q08723 MCH5YOR306C 1566 nt10.98□□□□□ -0.65
RPN8Q08723 RRT5YFR032C 870 nt10.97□□□□□ -0.65
RPN8Q08723 TIM23YNR017W 669 nt10.97□□□□□ -0.65
RPN8Q08723 YFR018CYFR018C 1092 nt10.96□□□□□ -0.65
RPN8Q08723 YPR064WYPR064W 420 nt10.93□□□□□ -0.66
RPN8Q08723 HSP60YLR259C 1719 nt10.92□□□□□ -0.66
RPN8Q08723 DIC1YLR348C 897 nt10.91□□□□□ -0.66
RPN8Q08723 ADH2YMR303C 1047 nt10.9□□□□□ -0.66
RPN8Q08723 SNF6YHL025W 999 nt10.89□□□□□ -0.67
RPN8Q08723 ALG12YNR030W 1656 nt10.89□□□□□ -0.67
RPN8Q08723 YLR179CYLR179C 606 nt10.88□□□□□ -0.67
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms