Protein–RNA interactions for Protein: Q08417

RSB1, Sphingoid long-chain base transporter RSB1, yeastyeast

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSB1Q08417 YPR011CYPR011C 981 nt12.4□□□□□ -0.42
RSB1Q08417 YPS1YLR120C 1710 nt12.4□□□□□ -0.43
RSB1Q08417 SUF2tP(AGG)C 72 nt12.39□□□□□ -0.43
RSB1Q08417 SUF10tP(AGG)N 72 nt12.39□□□□□ -0.43
RSB1Q08417 DSK2YMR276W 1122 nt12.38□□□□□ -0.43
RSB1Q08417 YDR095CYDR095C 411 nt12.37□□□□□ -0.43
RSB1Q08417 YLR236CYLR236C 324 nt12.35□□□□□ -0.43
RSB1Q08417 IMP2'YIL154C 1041 nt12.33□□□□□ -0.44
RSB1Q08417 FMP45YDL222C 930 nt12.32□□□□□ -0.44
RSB1Q08417 DCW1YKL046C 1350 nt12.3□□□□□ -0.44
RSB1Q08417 TAT1YBR069C 1860 nt12.29□□□□□ -0.44
RSB1Q08417 SIS1YNL007C 1059 nt12.26□□□□□ -0.45
RSB1Q08417 YJL152WYJL152W 360 nt12.22□□□□□ -0.45
RSB1Q08417 YCH1YGR203W 447 nt12.21□□□□□ -0.45
RSB1Q08417 YHR165W-AYHR165W-A 312 nt12.21□□□□□ -0.45
RSB1Q08417 TIR4YOR009W 1464 nt12.14□□□□□ -0.47
RSB1Q08417 RPP2AYOL039W 321 nt12.13□□□□□ -0.47
RSB1Q08417 EMI2YDR516C 1503 nt12.12□□□□□ -0.47
RSB1Q08417 LPX1YOR084W 1164 nt12.12□□□□□ -0.47
RSB1Q08417 ERV46YAL042W 1248 nt12.11□□□□□ -0.47
RSB1Q08417 IDH1YNL037C 1083 nt12.11□□□□□ -0.47
RSB1Q08417 YBR220CYBR220C 1683 nt12.1□□□□□ -0.47
RSB1Q08417 YMR090WYMR090W 684 nt12.1□□□□□ -0.47
RSB1Q08417 PTP1YDL230W 1008 nt12.09□□□□□ -0.47
RSB1Q08417 ART5YGR068C 1761 nt12.03□□□□□ -0.48
RSB1Q08417 MRPL8YJL063C 717 nt12.03□□□□□ -0.48
RSB1Q08417 YDL221WYDL221W 552 nt12.01□□□□□ -0.49
RSB1Q08417 YDR433WYDR433W 441 nt12□□□□□ -0.49
RSB1Q08417 SPP1YPL138C 1062 nt12□□□□□ -0.49
RSB1Q08417 PET9YBL030C 957 nt11.99□□□□□ -0.49
RSB1Q08417 GBP2YCL011C 1284 nt11.98□□□□□ -0.49
RSB1Q08417 CAC2YML102W 1407 nt11.97□□□□□ -0.49
RSB1Q08417 YKR040CYKR040C 504 nt11.97□□□□□ -0.49
RSB1Q08417 SDH1YKL148C 1923 nt11.97□□□□□ -0.49
RSB1Q08417 YMR057CYMR057C 372 nt11.96□□□□□ -0.49
RSB1Q08417 GFD2YCL036W 1701 nt11.96□□□□□ -0.49
RSB1Q08417 MXR2YCL033C 507 nt11.92□□□□□ -0.5
RSB1Q08417 RTG1YOL067C 534 nt11.88□□□□□ -0.51
RSB1Q08417 YCL048W-AYCL048W-A 240 nt11.88□□□□□ -0.51
RSB1Q08417 YEL076C-AYEL076C-A 651 nt11.86□□□□□ -0.51
RSB1Q08417 YEL076CYEL076C 651 nt11.86□□□□□ -0.51
RSB1Q08417 YLR464WYLR464W 651 nt11.86□□□□□ -0.51
RSB1Q08417 ADO1YJR105W 1023 nt11.85□□□□□ -0.51
RSB1Q08417 PAC11YDR488C 1602 nt11.81□□□□□ -0.52
RSB1Q08417 SCC4YER147C 1875 nt11.8□□□□□ -0.52
RSB1Q08417 TCD2YKL027W 1344 nt11.8□□□□□ -0.52
RSB1Q08417 FPS1YLL043W 2010 nt11.78□□□□□ -0.52
RSB1Q08417 IRC15YPL017C 1500 nt11.78□□□□□ -0.52
RSB1Q08417 PCH2YBR186W 1695 nt11.78□□□□□ -0.52
RSB1Q08417 SEC11YIR022W 504 nt11.77□□□□□ -0.53
RSB1Q08417 RTS2YOR077W 699 nt11.76□□□□□ -0.53
RSB1Q08417 DED1YOR204W 1815 nt11.76□□□□□ -0.53
RSB1Q08417 RRD1YIL153W 1182 nt11.74□□□□□ -0.53
RSB1Q08417 GUT2YIL155C 1950 nt11.74□□□□□ -0.53
RSB1Q08417 GIS3YLR094C 1509 nt11.7□□□□□ -0.54
RSB1Q08417 FRD1YEL047C 1413 nt11.7□□□□□ -0.54
RSB1Q08417 CUE1YMR264W 612 nt11.67□□□□□ -0.54
RSB1Q08417 UBX6YJL048C 1191 nt11.65□□□□□ -0.54
RSB1Q08417 FMT1YBL013W 1206 nt11.63□□□□□ -0.55
RSB1Q08417 SOR2YDL246C 1074 nt11.6□□□□□ -0.55
RSB1Q08417 HUA1YGR268C 597 nt11.6□□□□□ -0.55
RSB1Q08417 SOR1YJR159W 1074 nt11.6□□□□□ -0.55
RSB1Q08417 YSC84YHR016C 1407 nt11.58□□□□□ -0.56
RSB1Q08417 YCL042WYCL042W 360 nt11.57□□□□□ -0.56
RSB1Q08417 PIB2YGL023C 1908 nt11.56□□□□□ -0.56
RSB1Q08417 PTH1YHR189W 573 nt11.55□□□□□ -0.56
RSB1Q08417 YHL050CYHL050C 2094 nt11.52□□□□□ -0.57
RSB1Q08417 FMP52YER004W 696 nt11.51□□□□□ -0.57
RSB1Q08417 YLR235CYLR235C 399 nt11.5□□□□□ -0.57
RSB1Q08417 YIL100WYIL100W 354 nt11.49□□□□□ -0.57
RSB1Q08417 YKL030WYKL030W 606 nt11.49□□□□□ -0.57
RSB1Q08417 YDR094WYDR094W 336 nt11.47□□□□□ -0.57
RSB1Q08417 CWP1YKL096W 720 nt11.45□□□□□ -0.58
RSB1Q08417 RTF1YGL244W 1677 nt11.45□□□□□ -0.58
RSB1Q08417 ADH2YMR303C 1047 nt11.43□□□□□ -0.58
RSB1Q08417 LCB1YMR296C 1677 nt11.43□□□□□ -0.58
RSB1Q08417 RRT12YCR045C 1476 nt11.41□□□□□ -0.58
RSB1Q08417 NVJ2YPR091C 2313 nt11.4□□□□□ -0.58
RSB1Q08417 YJL225CYJL225C 5277 nt11.38□□□□□ -0.59
RSB1Q08417 BOP3YNL042W 1191 nt11.35□□□□□ -0.59
RSB1Q08417 YNL195CYNL195C 786 nt11.35□□□□□ -0.59
RSB1Q08417 PCM1YEL058W 1674 nt11.33□□□□□ -0.6
RSB1Q08417 DIC1YLR348C 897 nt11.31□□□□□ -0.6
RSB1Q08417 YFL015W-AYFL015W-A 318 nt11.3□□□□□ -0.6
RSB1Q08417 SNF6YHL025W 999 nt11.3□□□□□ -0.6
RSB1Q08417 TIM23YNR017W 669 nt11.3□□□□□ -0.6
RSB1Q08417 PTK1YKL198C 1989 nt11.3□□□□□ -0.6
RSB1Q08417 YIH1YCR059C 777 nt11.24□□□□□ -0.61
RSB1Q08417 RNQ1YCL028W 1218 nt11.24□□□□□ -0.61
RSB1Q08417 tL(GAG)GtL(GAG)G 82 nt11.22□□□□□ -0.61
RSB1Q08417 YLR179CYLR179C 606 nt11.22□□□□□ -0.61
RSB1Q08417 NCP1YHR042W 2076 nt11.2□□□□□ -0.62
RSB1Q08417 YFR018CYFR018C 1092 nt11.18□□□□□ -0.62
RSB1Q08417 YPR064WYPR064W 420 nt11.16□□□□□ -0.62
RSB1Q08417 WSC2YNL283C 1512 nt11.15□□□□□ -0.62
RSB1Q08417 AHT1YHR093W 549 nt11.14□□□□□ -0.63
RSB1Q08417 TAD3YLR316C 969 nt11.13□□□□□ -0.63
RSB1Q08417 PAU16YKL224C 372 nt11.12□□□□□ -0.63
RSB1Q08417 YLL053CYLL053C 459 nt11.11□□□□□ -0.63
RSB1Q08417 BIO4YNR057C 714 nt11.11□□□□□ -0.63
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms