Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 IMT1tM(CAU)O1 72 nt11.69□□□□□ -0.54
RRP40Q08285 IMT2tM(CAU)P 72 nt11.69□□□□□ -0.54
RRP40Q08285 PTP1YDL230W 1008 nt11.68□□□□□ -0.54
RRP40Q08285 DCW1YKL046C 1350 nt11.67□□□□□ -0.54
RRP40Q08285 YLR154C-GYLR154C-G 150 nt11.67□□□□□ -0.54
RRP40Q08285 PUS2YGL063W 1113 nt11.61□□□□□ -0.55
RRP40Q08285 TIR4YOR009W 1464 nt11.58□□□□□ -0.56
RRP40Q08285 CAC2YML102W 1407 nt11.57□□□□□ -0.56
RRP40Q08285 ART5YGR068C 1761 nt11.56□□□□□ -0.56
RRP40Q08285 BDF1YLR399C 2061 nt11.55□□□□□ -0.56
RRP40Q08285 YJL152WYJL152W 360 nt11.54□□□□□ -0.56
RRP40Q08285 EMI2YDR516C 1503 nt11.53□□□□□ -0.56
RRP40Q08285 GFD2YCL036W 1701 nt11.52□□□□□ -0.56
RRP40Q08285 YCH1YGR203W 447 nt11.51□□□□□ -0.57
RRP40Q08285 PET9YBL030C 957 nt11.51□□□□□ -0.57
RRP40Q08285 YDL221WYDL221W 552 nt11.47□□□□□ -0.57
RRP40Q08285 DSK2YMR276W 1122 nt11.47□□□□□ -0.57
RRP40Q08285 IMP2'YIL154C 1041 nt11.45□□□□□ -0.58
RRP40Q08285 YLR236CYLR236C 324 nt11.44□□□□□ -0.58
RRP40Q08285 YMR090WYMR090W 684 nt11.43□□□□□ -0.58
RRP40Q08285 YMR057CYMR057C 372 nt11.42□□□□□ -0.58
RRP40Q08285 IRC15YPL017C 1500 nt11.41□□□□□ -0.58
RRP40Q08285 YPR011CYPR011C 981 nt11.41□□□□□ -0.58
RRP40Q08285 RTS2YOR077W 699 nt11.38□□□□□ -0.59
RRP40Q08285 PAC11YDR488C 1602 nt11.38□□□□□ -0.59
RRP40Q08285 IDH1YNL037C 1083 nt11.37□□□□□ -0.59
RRP40Q08285 TAT1YBR069C 1860 nt11.37□□□□□ -0.59
RRP40Q08285 FMP45YDL222C 930 nt11.33□□□□□ -0.6
RRP40Q08285 YCL048W-AYCL048W-A 240 nt11.32□□□□□ -0.6
RRP40Q08285 GIS3YLR094C 1509 nt11.31□□□□□ -0.6
RRP40Q08285 SDH1YKL148C 1923 nt11.31□□□□□ -0.6
RRP40Q08285 YBR220CYBR220C 1683 nt11.3□□□□□ -0.6
RRP40Q08285 FPS1YLL043W 2010 nt11.29□□□□□ -0.6
RRP40Q08285 CUE1YMR264W 612 nt11.28□□□□□ -0.6
RRP40Q08285 GBP2YCL011C 1284 nt11.27□□□□□ -0.61
RRP40Q08285 SCC4YER147C 1875 nt11.25□□□□□ -0.61
RRP40Q08285 MOT3YMR070W 1473 nt11.25□□□□□ -0.61
RRP40Q08285 ERV46YAL042W 1248 nt11.24□□□□□ -0.61
RRP40Q08285 LPX1YOR084W 1164 nt11.24□□□□□ -0.61
RRP40Q08285 YDR433WYDR433W 441 nt11.21□□□□□ -0.61
RRP40Q08285 TCD2YKL027W 1344 nt11.14□□□□□ -0.63
RRP40Q08285 MXR2YCL033C 507 nt11.14□□□□□ -0.63
RRP40Q08285 NVJ2YPR091C 2313 nt11.13□□□□□ -0.63
RRP40Q08285 RRD1YIL153W 1182 nt11.13□□□□□ -0.63
RRP40Q08285 YKR040CYKR040C 504 nt11.13□□□□□ -0.63
RRP40Q08285 YIL100WYIL100W 354 nt11.12□□□□□ -0.63
RRP40Q08285 DED1YOR204W 1815 nt11.11□□□□□ -0.63
RRP40Q08285 SPP1YPL138C 1062 nt11.01□□□□□ -0.65
RRP40Q08285 FMT1YBL013W 1206 nt11□□□□□ -0.65
RRP40Q08285 FMP52YER004W 696 nt10.98□□□□□ -0.65
RRP40Q08285 FRD1YEL047C 1413 nt10.97□□□□□ -0.65
RRP40Q08285 YSC84YHR016C 1407 nt10.96□□□□□ -0.65
RRP40Q08285 SOR2YDL246C 1074 nt10.95□□□□□ -0.66
RRP40Q08285 SOR1YJR159W 1074 nt10.95□□□□□ -0.66
RRP40Q08285 YNL195CYNL195C 786 nt10.95□□□□□ -0.66
RRP40Q08285 RRT12YCR045C 1476 nt10.93□□□□□ -0.66
RRP40Q08285 YHL050CYHL050C 2094 nt10.92□□□□□ -0.66
RRP40Q08285 YCL042WYCL042W 360 nt10.91□□□□□ -0.66
RRP40Q08285 SEC11YIR022W 504 nt10.88□□□□□ -0.67
RRP40Q08285 CWP1YKL096W 720 nt10.87□□□□□ -0.67
RRP40Q08285 ADH2YMR303C 1047 nt10.86□□□□□ -0.67
RRP40Q08285 PCM1YEL058W 1674 nt10.84□□□□□ -0.67
RRP40Q08285 MRPL8YJL063C 717 nt10.81□□□□□ -0.68
RRP40Q08285 RTG1YOL067C 534 nt10.81□□□□□ -0.68
RRP40Q08285 PCH2YBR186W 1695 nt10.81□□□□□ -0.68
RRP40Q08285 SNF6YHL025W 999 nt10.78□□□□□ -0.68
RRP40Q08285 YEL076C-AYEL076C-A 651 nt10.76□□□□□ -0.69
RRP40Q08285 YEL076CYEL076C 651 nt10.76□□□□□ -0.69
RRP40Q08285 PTH1YHR189W 573 nt10.76□□□□□ -0.69
RRP40Q08285 YLR464WYLR464W 651 nt10.76□□□□□ -0.69
RRP40Q08285 GUT2YIL155C 1950 nt10.75□□□□□ -0.69
RRP40Q08285 YLR235CYLR235C 399 nt10.73□□□□□ -0.69
RRP40Q08285 YIH1YCR059C 777 nt10.69□□□□□ -0.7
RRP40Q08285 ADO1YJR105W 1023 nt10.69□□□□□ -0.7
RRP40Q08285 DIC1YLR348C 897 nt10.69□□□□□ -0.7
RRP40Q08285 LCB1YMR296C 1677 nt10.67□□□□□ -0.7
RRP40Q08285 YKL030WYKL030W 606 nt10.67□□□□□ -0.7
RRP40Q08285 RNQ1YCL028W 1218 nt10.67□□□□□ -0.7
RRP40Q08285 BIO4YNR057C 714 nt10.66□□□□□ -0.7
RRP40Q08285 SIM1YIL123W 1431 nt10.66□□□□□ -0.7
RRP40Q08285 NCP1YHR042W 2076 nt10.62□□□□□ -0.71
RRP40Q08285 PIB2YGL023C 1908 nt10.61□□□□□ -0.71
RRP40Q08285 HUA1YGR268C 597 nt10.6□□□□□ -0.71
RRP40Q08285 TIM23YNR017W 669 nt10.6□□□□□ -0.71
RRP40Q08285 RTF1YGL244W 1677 nt10.6□□□□□ -0.71
RRP40Q08285 YLL053CYLL053C 459 nt10.58□□□□□ -0.72
RRP40Q08285 BOP3YNL042W 1191 nt10.58□□□□□ -0.72
RRP40Q08285 YLR179CYLR179C 606 nt10.54□□□□□ -0.72
RRP40Q08285 FTR1YER145C 1215 nt10.52□□□□□ -0.73
RRP40Q08285 GAL1YBR020W 1587 nt10.48□□□□□ -0.73
RRP40Q08285 ERF2YLR246W 1080 nt10.48□□□□□ -0.73
RRP40Q08285 AQY1YPR192W 918 nt10.47□□□□□ -0.73
RRP40Q08285 WSC2YNL283C 1512 nt10.47□□□□□ -0.73
RRP40Q08285 CRR1YLR213C 1269 nt10.46□□□□□ -0.73
RRP40Q08285 TRM5YHR070W 1500 nt10.45□□□□□ -0.74
RRP40Q08285 AHT1YHR093W 549 nt10.45□□□□□ -0.74
RRP40Q08285 YPR064WYPR064W 420 nt10.45□□□□□ -0.74
RRP40Q08285 LYS4YDR234W 2082 nt10.45□□□□□ -0.74
RRP40Q08285 ATF2YGR177C 1608 nt10.44□□□□□ -0.74
RRP40Q08285 PTK1YKL198C 1989 nt10.43□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms