Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 tM(CAU)CtM(CAU)C 72 nt14.56□□□□□ -0.08
BRE1Q07457 IMT4tM(CAU)E 72 nt14.56□□□□□ -0.08
BRE1Q07457 IMT3tM(CAU)J3 72 nt14.56□□□□□ -0.08
BRE1Q07457 IMT1tM(CAU)O1 72 nt14.56□□□□□ -0.08
BRE1Q07457 IMT2tM(CAU)P 72 nt14.56□□□□□ -0.08
BRE1Q07457 SSA4YER103W 1929 nt14.53□□□□□ -0.08
BRE1Q07457 CAC2YML102W 1407 nt14.51□□□□□ -0.09
BRE1Q07457 PUS2YGL063W 1113 nt14.51□□□□□ -0.09
BRE1Q07457 YJL152WYJL152W 360 nt14.49□□□□□ -0.09
BRE1Q07457 ART5YGR068C 1761 nt14.49□□□□□ -0.09
BRE1Q07457 TIR4YOR009W 1464 nt14.48□□□□□ -0.09
BRE1Q07457 EMI2YDR516C 1503 nt14.47□□□□□ -0.09
BRE1Q07457 GFD2YCL036W 1701 nt14.42□□□□□ -0.1
BRE1Q07457 PET9YBL030C 957 nt14.4□□□□□ -0.1
BRE1Q07457 YCH1YGR203W 447 nt14.38□□□□□ -0.11
BRE1Q07457 YMR090WYMR090W 684 nt14.37□□□□□ -0.11
BRE1Q07457 YDL221WYDL221W 552 nt14.36□□□□□ -0.11
BRE1Q07457 YMR057CYMR057C 372 nt14.34□□□□□ -0.11
BRE1Q07457 DSK2YMR276W 1122 nt14.29□□□□□ -0.12
BRE1Q07457 IRC15YPL017C 1500 nt14.29□□□□□ -0.12
BRE1Q07457 RTS2YOR077W 699 nt14.28□□□□□ -0.12
BRE1Q07457 IMP2'YIL154C 1041 nt14.25□□□□□ -0.13
BRE1Q07457 YLR236CYLR236C 324 nt14.24□□□□□ -0.13
BRE1Q07457 YPR011CYPR011C 981 nt14.24□□□□□ -0.13
BRE1Q07457 IDH1YNL037C 1083 nt14.21□□□□□ -0.13
BRE1Q07457 YCL048W-AYCL048W-A 240 nt14.19□□□□□ -0.14
BRE1Q07457 GIS3YLR094C 1509 nt14.19□□□□□ -0.14
BRE1Q07457 SDH1YKL148C 1923 nt14.17□□□□□ -0.14
BRE1Q07457 YBR220CYBR220C 1683 nt14.17□□□□□ -0.14
BRE1Q07457 FMP45YDL222C 930 nt14.14□□□□□ -0.15
BRE1Q07457 FPS1YLL043W 2010 nt14.12□□□□□ -0.15
BRE1Q07457 SCC4YER147C 1875 nt14.11□□□□□ -0.15
BRE1Q07457 CUE1YMR264W 612 nt14.11□□□□□ -0.15
BRE1Q07457 GBP2YCL011C 1284 nt14.1□□□□□ -0.15
BRE1Q07457 YDR433WYDR433W 441 nt14.04□□□□□ -0.16
BRE1Q07457 LPX1YOR084W 1164 nt14.01□□□□□ -0.17
BRE1Q07457 ERV46YAL042W 1248 nt13.97□□□□□ -0.17
BRE1Q07457 MOT3YMR070W 1473 nt13.96□□□□□ -0.17
BRE1Q07457 YIL100WYIL100W 354 nt13.96□□□□□ -0.17
BRE1Q07457 TCD2YKL027W 1344 nt13.94□□□□□ -0.18
BRE1Q07457 MXR2YCL033C 507 nt13.94□□□□□ -0.18
BRE1Q07457 BDF1YLR399C 2061 nt13.92□□□□□ -0.18
BRE1Q07457 RRD1YIL153W 1182 nt13.9□□□□□ -0.18
BRE1Q07457 YKR040CYKR040C 504 nt13.89□□□□□ -0.19
BRE1Q07457 DED1YOR204W 1815 nt13.86□□□□□ -0.19
BRE1Q07457 YNL195CYNL195C 786 nt13.77□□□□□ -0.21
BRE1Q07457 YSC84YHR016C 1407 nt13.76□□□□□ -0.21
BRE1Q07457 FMT1YBL013W 1206 nt13.75□□□□□ -0.21
BRE1Q07457 SPP1YPL138C 1062 nt13.75□□□□□ -0.21
BRE1Q07457 TAT1YBR069C 1860 nt13.75□□□□□ -0.21
BRE1Q07457 RRT12YCR045C 1476 nt13.74□□□□□ -0.21
BRE1Q07457 FMP52YER004W 696 nt13.7□□□□□ -0.22
BRE1Q07457 YHL050CYHL050C 2094 nt13.68□□□□□ -0.22
BRE1Q07457 FRD1YEL047C 1413 nt13.67□□□□□ -0.22
BRE1Q07457 YCL042WYCL042W 360 nt13.67□□□□□ -0.22
BRE1Q07457 SEC11YIR022W 504 nt13.66□□□□□ -0.22
BRE1Q07457 SOR2YDL246C 1074 nt13.63□□□□□ -0.23
BRE1Q07457 SOR1YJR159W 1074 nt13.63□□□□□ -0.23
BRE1Q07457 CWP1YKL096W 720 nt13.63□□□□□ -0.23
BRE1Q07457 ADH2YMR303C 1047 nt13.6□□□□□ -0.23
BRE1Q07457 PCM1YEL058W 1674 nt13.57□□□□□ -0.24
BRE1Q07457 PCH2YBR186W 1695 nt13.56□□□□□ -0.24
BRE1Q07457 SNF6YHL025W 999 nt13.5□□□□□ -0.25
BRE1Q07457 GUT2YIL155C 1950 nt13.48□□□□□ -0.25
BRE1Q07457 PTH1YHR189W 573 nt13.47□□□□□ -0.25
BRE1Q07457 RTG1YOL067C 534 nt13.42□□□□□ -0.26
BRE1Q07457 YLR235CYLR235C 399 nt13.39□□□□□ -0.27
BRE1Q07457 MRPL8YJL063C 717 nt13.38□□□□□ -0.27
BRE1Q07457 SIM1YIL123W 1431 nt13.38□□□□□ -0.27
BRE1Q07457 LCB1YMR296C 1677 nt13.35□□□□□ -0.27
BRE1Q07457 YEL076C-AYEL076C-A 651 nt13.35□□□□□ -0.27
BRE1Q07457 YEL076CYEL076C 651 nt13.35□□□□□ -0.27
BRE1Q07457 YLR464WYLR464W 651 nt13.35□□□□□ -0.27
BRE1Q07457 YIH1YCR059C 777 nt13.34□□□□□ -0.27
BRE1Q07457 DIC1YLR348C 897 nt13.34□□□□□ -0.27
BRE1Q07457 RNQ1YCL028W 1218 nt13.34□□□□□ -0.27
BRE1Q07457 BIO4YNR057C 714 nt13.33□□□□□ -0.28
BRE1Q07457 YKL030WYKL030W 606 nt13.32□□□□□ -0.28
BRE1Q07457 RTF1YGL244W 1677 nt13.29□□□□□ -0.28
BRE1Q07457 BOP3YNL042W 1191 nt13.29□□□□□ -0.28
BRE1Q07457 PIB2YGL023C 1908 nt13.27□□□□□ -0.28
BRE1Q07457 NCP1YHR042W 2076 nt13.27□□□□□ -0.28
BRE1Q07457 ADO1YJR105W 1023 nt13.27□□□□□ -0.29
BRE1Q07457 YLL053CYLL053C 459 nt13.25□□□□□ -0.29
BRE1Q07457 TIM23YNR017W 669 nt13.24□□□□□ -0.29
BRE1Q07457 HUA1YGR268C 597 nt13.2□□□□□ -0.3
BRE1Q07457 YLR179CYLR179C 606 nt13.19□□□□□ -0.3
BRE1Q07457 FTR1YER145C 1215 nt13.15□□□□□ -0.3
BRE1Q07457 ERF2YLR246W 1080 nt13.12□□□□□ -0.31
BRE1Q07457 GAL1YBR020W 1587 nt13.11□□□□□ -0.31
BRE1Q07457 TRM5YHR070W 1500 nt13.09□□□□□ -0.31
BRE1Q07457 PTK1YKL198C 1989 nt13.08□□□□□ -0.32
BRE1Q07457 ATF2YGR177C 1608 nt13.07□□□□□ -0.32
BRE1Q07457 CRR1YLR213C 1269 nt13.06□□□□□ -0.32
BRE1Q07457 YPR064WYPR064W 420 nt13.06□□□□□ -0.32
BRE1Q07457 LYS4YDR234W 2082 nt13.06□□□□□ -0.32
BRE1Q07457 AQY1YPR192W 918 nt13.05□□□□□ -0.32
BRE1Q07457 WSC2YNL283C 1512 nt13.04□□□□□ -0.32
BRE1Q07457 AHT1YHR093W 549 nt13.03□□□□□ -0.32
BRE1Q07457 YFL067WYFL067W 528 nt13.02□□□□□ -0.33
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms