Protein–RNA interactions for Protein: Q06263

VTA1, Vacuolar protein sorting-associated protein VTA1, yeastyeast

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTA1Q06263 IMT4tM(CAU)E 72 nt12.15□□□□□ -0.46
VTA1Q06263 IMT3tM(CAU)J3 72 nt12.15□□□□□ -0.46
VTA1Q06263 IMT1tM(CAU)O1 72 nt12.15□□□□□ -0.46
VTA1Q06263 IMT2tM(CAU)P 72 nt12.15□□□□□ -0.46
VTA1Q06263 YLR154C-GYLR154C-G 150 nt12.15□□□□□ -0.46
VTA1Q06263 PTP1YDL230W 1008 nt12.09□□□□□ -0.47
VTA1Q06263 PUS2YGL063W 1113 nt12.09□□□□□ -0.47
VTA1Q06263 BDF1YLR399C 2061 nt12.06□□□□□ -0.48
VTA1Q06263 YCH1YGR203W 447 nt12.03□□□□□ -0.48
VTA1Q06263 EMI2YDR516C 1503 nt12.02□□□□□ -0.48
VTA1Q06263 IMP2'YIL154C 1041 nt12.01□□□□□ -0.49
VTA1Q06263 YJL152WYJL152W 360 nt12.01□□□□□ -0.49
VTA1Q06263 PAC11YDR488C 1602 nt12□□□□□ -0.49
VTA1Q06263 PET9YBL030C 957 nt12□□□□□ -0.49
VTA1Q06263 TIR4YOR009W 1464 nt11.99□□□□□ -0.49
VTA1Q06263 ART5YGR068C 1761 nt11.99□□□□□ -0.49
VTA1Q06263 CAC2YML102W 1407 nt11.96□□□□□ -0.49
VTA1Q06263 YMR090WYMR090W 684 nt11.96□□□□□ -0.49
VTA1Q06263 GFD2YCL036W 1701 nt11.94□□□□□ -0.5
VTA1Q06263 DSK2YMR276W 1122 nt11.94□□□□□ -0.5
VTA1Q06263 YDL221WYDL221W 552 nt11.92□□□□□ -0.5
VTA1Q06263 YBR220CYBR220C 1683 nt11.89□□□□□ -0.51
VTA1Q06263 TAT1YBR069C 1860 nt11.87□□□□□ -0.51
VTA1Q06263 IDH1YNL037C 1083 nt11.87□□□□□ -0.51
VTA1Q06263 YMR057CYMR057C 372 nt11.85□□□□□ -0.51
VTA1Q06263 YLR236CYLR236C 324 nt11.83□□□□□ -0.52
VTA1Q06263 SDH1YKL148C 1923 nt11.82□□□□□ -0.52
VTA1Q06263 YCL048W-AYCL048W-A 240 nt11.81□□□□□ -0.52
VTA1Q06263 IRC15YPL017C 1500 nt11.81□□□□□ -0.52
VTA1Q06263 YPR011CYPR011C 981 nt11.79□□□□□ -0.52
VTA1Q06263 FMP45YDL222C 930 nt11.78□□□□□ -0.52
VTA1Q06263 RTS2YOR077W 699 nt11.77□□□□□ -0.53
VTA1Q06263 NVJ2YPR091C 2313 nt11.74□□□□□ -0.53
VTA1Q06263 CUE1YMR264W 612 nt11.73□□□□□ -0.53
VTA1Q06263 GBP2YCL011C 1284 nt11.73□□□□□ -0.53
VTA1Q06263 GIS3YLR094C 1509 nt11.72□□□□□ -0.53
VTA1Q06263 SCC4YER147C 1875 nt11.7□□□□□ -0.54
VTA1Q06263 FPS1YLL043W 2010 nt11.7□□□□□ -0.54
VTA1Q06263 ERV46YAL042W 1248 nt11.69□□□□□ -0.54
VTA1Q06263 MOT3YMR070W 1473 nt11.69□□□□□ -0.54
VTA1Q06263 YDR433WYDR433W 441 nt11.67□□□□□ -0.54
VTA1Q06263 LPX1YOR084W 1164 nt11.64□□□□□ -0.55
VTA1Q06263 TCD2YKL027W 1344 nt11.62□□□□□ -0.55
VTA1Q06263 YIL100WYIL100W 354 nt11.6□□□□□ -0.55
VTA1Q06263 YKR040CYKR040C 504 nt11.6□□□□□ -0.55
VTA1Q06263 RRD1YIL153W 1182 nt11.54□□□□□ -0.56
VTA1Q06263 SEC11YIR022W 504 nt11.53□□□□□ -0.56
VTA1Q06263 MXR2YCL033C 507 nt11.52□□□□□ -0.57
VTA1Q06263 DED1YOR204W 1815 nt11.49□□□□□ -0.57
VTA1Q06263 PCH2YBR186W 1695 nt11.49□□□□□ -0.57
VTA1Q06263 FMP52YER004W 696 nt11.47□□□□□ -0.57
VTA1Q06263 YNL195CYNL195C 786 nt11.45□□□□□ -0.58
VTA1Q06263 YSC84YHR016C 1407 nt11.43□□□□□ -0.58
VTA1Q06263 GUT2YIL155C 1950 nt11.43□□□□□ -0.58
VTA1Q06263 SOR2YDL246C 1074 nt11.39□□□□□ -0.59
VTA1Q06263 SOR1YJR159W 1074 nt11.39□□□□□ -0.59
VTA1Q06263 YCL042WYCL042W 360 nt11.39□□□□□ -0.59
VTA1Q06263 YHL050CYHL050C 2094 nt11.39□□□□□ -0.59
VTA1Q06263 YJL225CYJL225C 5277 nt11.37□□□□□ -0.59
VTA1Q06263 FRD1YEL047C 1413 nt11.37□□□□□ -0.59
VTA1Q06263 FMT1YBL013W 1206 nt11.37□□□□□ -0.59
VTA1Q06263 SPP1YPL138C 1062 nt11.36□□□□□ -0.59
VTA1Q06263 RRT12YCR045C 1476 nt11.33□□□□□ -0.6
VTA1Q06263 MRPL8YJL063C 717 nt11.31□□□□□ -0.6
VTA1Q06263 CWP1YKL096W 720 nt11.29□□□□□ -0.6
VTA1Q06263 PCM1YEL058W 1674 nt11.27□□□□□ -0.61
VTA1Q06263 ADH2YMR303C 1047 nt11.26□□□□□ -0.61
VTA1Q06263 PIB2YGL023C 1908 nt11.26□□□□□ -0.61
VTA1Q06263 SNF6YHL025W 999 nt11.23□□□□□ -0.61
VTA1Q06263 YLR235CYLR235C 399 nt11.21□□□□□ -0.61
VTA1Q06263 RTG1YOL067C 534 nt11.21□□□□□ -0.61
VTA1Q06263 RDN37-1RDN37-1 5354 nt11.21□□□□□ -0.62
VTA1Q06263 RDN37-2RDN37-2 5354 nt11.21□□□□□ -0.62
VTA1Q06263 RTF1YGL244W 1677 nt11.2□□□□□ -0.62
VTA1Q06263 YEL076C-AYEL076C-A 651 nt11.2□□□□□ -0.62
VTA1Q06263 YEL076CYEL076C 651 nt11.2□□□□□ -0.62
VTA1Q06263 ADO1YJR105W 1023 nt11.2□□□□□ -0.62
VTA1Q06263 YLR464WYLR464W 651 nt11.2□□□□□ -0.62
VTA1Q06263 BOP3YNL042W 1191 nt11.16□□□□□ -0.62
VTA1Q06263 PTH1YHR189W 573 nt11.15□□□□□ -0.62
VTA1Q06263 YIH1YCR059C 777 nt11.12□□□□□ -0.63
VTA1Q06263 YKL030WYKL030W 606 nt11.12□□□□□ -0.63
VTA1Q06263 RNQ1YCL028W 1218 nt11.12□□□□□ -0.63
VTA1Q06263 DIC1YLR348C 897 nt11.11□□□□□ -0.63
VTA1Q06263 SIM1YIL123W 1431 nt11.09□□□□□ -0.63
VTA1Q06263 HUA1YGR268C 597 nt11.08□□□□□ -0.64
VTA1Q06263 NCP1YHR042W 2076 nt11.07□□□□□ -0.64
VTA1Q06263 BIO4YNR057C 714 nt11.06□□□□□ -0.64
VTA1Q06263 TIM23YNR017W 669 nt11.04□□□□□ -0.64
VTA1Q06263 LCB1YMR296C 1677 nt11.04□□□□□ -0.64
VTA1Q06263 PTK1YKL198C 1989 nt11.03□□□□□ -0.64
VTA1Q06263 YLL053CYLL053C 459 nt10.99□□□□□ -0.65
VTA1Q06263 YLR179CYLR179C 606 nt10.97□□□□□ -0.65
VTA1Q06263 AQY1YPR192W 918 nt10.95□□□□□ -0.66
VTA1Q06263 FTR1YER145C 1215 nt10.94□□□□□ -0.66
VTA1Q06263 ERF2YLR246W 1080 nt10.93□□□□□ -0.66
VTA1Q06263 YPR064WYPR064W 420 nt10.91□□□□□ -0.66
VTA1Q06263 GAL1YBR020W 1587 nt10.9□□□□□ -0.67
VTA1Q06263 YFL067WYFL067W 528 nt10.87□□□□□ -0.67
VTA1Q06263 AHT1YHR093W 549 nt10.87□□□□□ -0.67
Retrieved 100 of 7,029 protein–RNA pairs in 10.3 ms