Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 SCC4YER147C 1875 nt10.91□□□□□ -0.66
TY1A-MR1Q04215 IRC15YPL017C 1500 nt10.9□□□□□ -0.66
TY1A-MR1Q04215 PST2YDR032C 597 nt10.89□□□□□ -0.67
TY1A-MR1Q04215 WWM1YFL010C 636 nt10.89□□□□□ -0.67
TY1A-MR1Q04215 LSM3YLR438C-A 270 nt10.89□□□□□ -0.67
TY1A-MR1Q04215 SIS1YNL007C 1059 nt10.89□□□□□ -0.67
TY1A-MR1Q04215 PCH2YBR186W 1695 nt10.85□□□□□ -0.67
TY1A-MR1Q04215 PAC11YDR488C 1602 nt10.85□□□□□ -0.67
TY1A-MR1Q04215 SUF2tP(AGG)C 72 nt10.85□□□□□ -0.67
TY1A-MR1Q04215 SUF10tP(AGG)N 72 nt10.85□□□□□ -0.67
TY1A-MR1Q04215 BUR6YER159C 429 nt10.84□□□□□ -0.67
TY1A-MR1Q04215 SEC11YIR022W 504 nt10.84□□□□□ -0.67
TY1A-MR1Q04215 GIS3YLR094C 1509 nt10.83□□□□□ -0.68
TY1A-MR1Q04215 GUT2YIL155C 1950 nt10.81□□□□□ -0.68
TY1A-MR1Q04215 GFD2YCL036W 1701 nt10.78□□□□□ -0.68
TY1A-MR1Q04215 BMT5YIL096C 1011 nt10.78□□□□□ -0.68
TY1A-MR1Q04215 ART5YGR068C 1761 nt10.76□□□□□ -0.69
TY1A-MR1Q04215 YFL021C-AYFL021C-A 855 nt10.75□□□□□ -0.69
TY1A-MR1Q04215 YSC84YHR016C 1407 nt10.71□□□□□ -0.69
TY1A-MR1Q04215 RTS2YOR077W 699 nt10.71□□□□□ -0.69
TY1A-MR1Q04215 YGR021WYGR021W 873 nt10.7□□□□□ -0.7
TY1A-MR1Q04215 Q0010Q0010 387 nt10.69□□□□□ -0.7
TY1A-MR1Q04215 PET9YBL030C 957 nt10.68□□□□□ -0.7
TY1A-MR1Q04215 Q0144Q0144 330 nt10.66□□□□□ -0.7
TY1A-MR1Q04215 PIB2YGL023C 1908 nt10.64□□□□□ -0.71
TY1A-MR1Q04215 YHL050CYHL050C 2094 nt10.64□□□□□ -0.71
TY1A-MR1Q04215 HOM6YJR139C 1080 nt10.63□□□□□ -0.71
TY1A-MR1Q04215 CUE1YMR264W 612 nt10.62□□□□□ -0.71
TY1A-MR1Q04215 YCH1YGR203W 447 nt10.6□□□□□ -0.71
TY1A-MR1Q04215 TIR4YOR009W 1464 nt10.58□□□□□ -0.72
TY1A-MR1Q04215 SHU1YHL006C 453 nt10.56□□□□□ -0.72
TY1A-MR1Q04215 RTF1YGL244W 1677 nt10.56□□□□□ -0.72
TY1A-MR1Q04215 SEM1YDR363W-A 270 nt10.55□□□□□ -0.72
TY1A-MR1Q04215 RRT12YCR045C 1476 nt10.55□□□□□ -0.72
TY1A-MR1Q04215 YIR018C-AYIR018C-A 138 nt10.54□□□□□ -0.72
TY1A-MR1Q04215 SRN2YLR119W 642 nt10.54□□□□□ -0.72
TY1A-MR1Q04215 YAL037C-BYAL037C-B 975 nt10.53□□□□□ -0.72
TY1A-MR1Q04215 MNP1YGL068W 585 nt10.52□□□□□ -0.73
TY1A-MR1Q04215 FPS1YLL043W 2010 nt10.5□□□□□ -0.73
TY1A-MR1Q04215 ARA2YMR041C 1008 nt10.5□□□□□ -0.73
TY1A-MR1Q04215 YNL195CYNL195C 786 nt10.5□□□□□ -0.73
TY1A-MR1Q04215 NVJ2YPR091C 2313 nt10.5□□□□□ -0.73
TY1A-MR1Q04215 YIL100WYIL100W 354 nt10.49□□□□□ -0.73
TY1A-MR1Q04215 YMR057CYMR057C 372 nt10.49□□□□□ -0.73
TY1A-MR1Q04215 RKM5YLR137W 1104 nt10.48□□□□□ -0.73
TY1A-MR1Q04215 BOP3YNL042W 1191 nt10.47□□□□□ -0.73
TY1A-MR1Q04215 PTK1YKL198C 1989 nt10.39□□□□□ -0.75
TY1A-MR1Q04215 YLR236CYLR236C 324 nt10.39□□□□□ -0.75
TY1A-MR1Q04215 NPL3YDR432W 1245 nt10.36□□□□□ -0.75
TY1A-MR1Q04215 YEL009C-AYEL009C-A 408 nt10.35□□□□□ -0.75
TY1A-MR1Q04215 NCP1YHR042W 2076 nt10.32□□□□□ -0.76
TY1A-MR1Q04215 YLR122CYLR122C 378 nt10.31□□□□□ -0.76
TY1A-MR1Q04215 ABZ2YMR289W 1125 nt10.3□□□□□ -0.76
TY1A-MR1Q04215 ARP10YDR106W 855 nt10.29□□□□□ -0.76
TY1A-MR1Q04215 YJL152WYJL152W 360 nt10.28□□□□□ -0.76
TY1A-MR1Q04215 YJL225CYJL225C 5277 nt10.27□□□□□ -0.76
TY1A-MR1Q04215 YLR154C-GYLR154C-G 150 nt10.27□□□□□ -0.77
TY1A-MR1Q04215 YCL048W-AYCL048W-A 240 nt10.27□□□□□ -0.77
TY1A-MR1Q04215 MET8YBR213W 825 nt10.23□□□□□ -0.77
TY1A-MR1Q04215 YKL097CYKL097C 411 nt10.21□□□□□ -0.77
TY1A-MR1Q04215 YFL054CYFL054C 1941 nt10.17□□□□□ -0.78
TY1A-MR1Q04215 LCB1YMR296C 1677 nt10.16□□□□□ -0.78
TY1A-MR1Q04215 YOL037CYOL037C 354 nt10.16□□□□□ -0.78
TY1A-MR1Q04215 YCR099CYCR099C 468 nt10.14□□□□□ -0.79
TY1A-MR1Q04215 SPT8YLR055C 1809 nt10.13□□□□□ -0.79
TY1A-MR1Q04215 CLB6YGR109C 1143 nt10.12□□□□□ -0.79
TY1A-MR1Q04215 PET20YPL159C 762 nt10.12□□□□□ -0.79
TY1A-MR1Q04215 Q0142Q0142 177 nt10.11□□□□□ -0.79
TY1A-MR1Q04215 AI3Q0060 1248 nt10.08□□□□□ -0.8
TY1A-MR1Q04215 TOM20YGR082W 552 nt10.05□□□□□ -0.8
TY1A-MR1Q04215 RRD1YIL153W 1182 nt10.05□□□□□ -0.8
TY1A-MR1Q04215 AI5_BETAQ0075 1065 nt10.04□□□□□ -0.8
TY1A-MR1Q04215 UTP6YDR449C 1323 nt10.04□□□□□ -0.8
TY1A-MR1Q04215 BOR1YNL275W 1731 nt10.02□□□□□ -0.81
TY1A-MR1Q04215 FMP52YER004W 696 nt10.01□□□□□ -0.81
TY1A-MR1Q04215 IDH1YNL037C 1083 nt9.98□□□□□ -0.81
TY1A-MR1Q04215 WHI5YOR083W 888 nt9.98□□□□□ -0.81
TY1A-MR1Q04215 SIM1YIL123W 1431 nt9.98□□□□□ -0.81
TY1A-MR1Q04215 PCM1YEL058W 1674 nt9.96□□□□□ -0.81
TY1A-MR1Q04215 LYS4YDR234W 2082 nt9.95□□□□□ -0.82
TY1A-MR1Q04215 GBP2YCL011C 1284 nt9.95□□□□□ -0.82
TY1A-MR1Q04215 SWE1YJL187C 2460 nt9.95□□□□□ -0.82
TY1A-MR1Q04215 DED1YOR204W 1815 nt9.94□□□□□ -0.82
TY1A-MR1Q04215 snR78snR78 87 nt9.94□□□□□ -0.82
TY1A-MR1Q04215 LCP5YER127W 1074 nt9.93□□□□□ -0.82
TY1A-MR1Q04215 SKG1YKR100C 1068 nt9.93□□□□□ -0.82
TY1A-MR1Q04215 YLR281CYLR281C 468 nt9.93□□□□□ -0.82
TY1A-MR1Q04215 Q0017Q0017 162 nt9.92□□□□□ -0.82
TY1A-MR1Q04215 TCD2YKL027W 1344 nt9.91□□□□□ -0.82
TY1A-MR1Q04215 YOR139CYOR139C 393 nt9.9□□□□□ -0.82
TY1A-MR1Q04215 FMT1YBL013W 1206 nt9.89□□□□□ -0.83
TY1A-MR1Q04215 BIO4YNR057C 714 nt9.88□□□□□ -0.83
TY1A-MR1Q04215 YNR068CYNR068C 819 nt9.88□□□□□ -0.83
TY1A-MR1Q04215 URH1YDR400W 1023 nt9.87□□□□□ -0.83
TY1A-MR1Q04215 Q0255Q0255 1419 nt9.87□□□□□ -0.83
TY1A-MR1Q04215 SNF6YHL025W 999 nt9.85□□□□□ -0.83
TY1A-MR1Q04215 ADH2YMR303C 1047 nt9.85□□□□□ -0.83
TY1A-MR1Q04215 HMT1YBR034C 1047 nt9.84□□□□□ -0.83
TY1A-MR1Q04215 RDN37-1RDN37-1 5354 nt9.84□□□□□ -0.83
TY1A-MR1Q04215 RDN37-2RDN37-2 5354 nt9.84□□□□□ -0.83
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms