Protein–RNA interactions for Protein: Q04121

NHX1, Endosomal/prevacuolar sodium/hydrogen exchanger, yeastyeast

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NHX1Q04121 CAC2YML102W 1407 nt12.41□□□□□ -0.42
NHX1Q04121 ART5YGR068C 1761 nt12.34□□□□□ -0.43
NHX1Q04121 YDL221WYDL221W 552 nt12.32□□□□□ -0.44
NHX1Q04121 YMR090WYMR090W 684 nt12.32□□□□□ -0.44
NHX1Q04121 YLR154C-GYLR154C-G 150 nt12.3□□□□□ -0.44
NHX1Q04121 GFD2YCL036W 1701 nt12.3□□□□□ -0.44
NHX1Q04121 TIR4YOR009W 1464 nt12.29□□□□□ -0.44
NHX1Q04121 YLR281CYLR281C 468 nt12.27□□□□□ -0.45
NHX1Q04121 PET9YBL030C 957 nt12.26□□□□□ -0.45
NHX1Q04121 WHI5YOR083W 888 nt12.26□□□□□ -0.45
NHX1Q04121 IRC15YPL017C 1500 nt12.23□□□□□ -0.45
NHX1Q04121 YJL152WYJL152W 360 nt12.23□□□□□ -0.45
NHX1Q04121 YCH1YGR203W 447 nt12.22□□□□□ -0.45
NHX1Q04121 YBR220CYBR220C 1683 nt12.2□□□□□ -0.46
NHX1Q04121 SDH1YKL148C 1923 nt12.18□□□□□ -0.46
NHX1Q04121 RTS2YOR077W 699 nt12.18□□□□□ -0.46
NHX1Q04121 YMR057CYMR057C 372 nt12.16□□□□□ -0.46
NHX1Q04121 GIS3YLR094C 1509 nt12.14□□□□□ -0.47
NHX1Q04121 tM(CAU)CtM(CAU)C 72 nt12.13□□□□□ -0.47
NHX1Q04121 IMT4tM(CAU)E 72 nt12.13□□□□□ -0.47
NHX1Q04121 IMT3tM(CAU)J3 72 nt12.13□□□□□ -0.47
NHX1Q04121 IMT1tM(CAU)O1 72 nt12.13□□□□□ -0.47
NHX1Q04121 IMT2tM(CAU)P 72 nt12.13□□□□□ -0.47
NHX1Q04121 BDF1YLR399C 2061 nt12.12□□□□□ -0.47
NHX1Q04121 PUS2YGL063W 1113 nt12.12□□□□□ -0.47
NHX1Q04121 SCC4YER147C 1875 nt12.1□□□□□ -0.47
NHX1Q04121 CUE1YMR264W 612 nt12.05□□□□□ -0.48
NHX1Q04121 FPS1YLL043W 2010 nt12.02□□□□□ -0.49
NHX1Q04121 YCL048W-AYCL048W-A 240 nt12.01□□□□□ -0.49
NHX1Q04121 DSK2YMR276W 1122 nt11.99□□□□□ -0.49
NHX1Q04121 IDH1YNL037C 1083 nt11.98□□□□□ -0.49
NHX1Q04121 IMP2'YIL154C 1041 nt11.97□□□□□ -0.49
NHX1Q04121 YLR236CYLR236C 324 nt11.96□□□□□ -0.49
NHX1Q04121 TAT1YBR069C 1860 nt11.95□□□□□ -0.5
NHX1Q04121 YPR011CYPR011C 981 nt11.94□□□□□ -0.5
NHX1Q04121 YIL100WYIL100W 354 nt11.9□□□□□ -0.5
NHX1Q04121 GBP2YCL011C 1284 nt11.9□□□□□ -0.5
NHX1Q04121 FMP45YDL222C 930 nt11.82□□□□□ -0.52
NHX1Q04121 YSC84YHR016C 1407 nt11.81□□□□□ -0.52
NHX1Q04121 YDR433WYDR433W 441 nt11.8□□□□□ -0.52
NHX1Q04121 RRD1YIL153W 1182 nt11.78□□□□□ -0.52
NHX1Q04121 SEC11YIR022W 504 nt11.77□□□□□ -0.53
NHX1Q04121 YNL195CYNL195C 786 nt11.77□□□□□ -0.53
NHX1Q04121 TCD2YKL027W 1344 nt11.77□□□□□ -0.53
NHX1Q04121 RRT12YCR045C 1476 nt11.76□□□□□ -0.53
NHX1Q04121 LPX1YOR084W 1164 nt11.76□□□□□ -0.53
NHX1Q04121 ERV46YAL042W 1248 nt11.75□□□□□ -0.53
NHX1Q04121 YHL050CYHL050C 2094 nt11.75□□□□□ -0.53
NHX1Q04121 MXR2YCL033C 507 nt11.74□□□□□ -0.53
NHX1Q04121 DED1YOR204W 1815 nt11.74□□□□□ -0.53
NHX1Q04121 PCH2YBR186W 1695 nt11.71□□□□□ -0.53
NHX1Q04121 YKR040CYKR040C 504 nt11.67□□□□□ -0.54
NHX1Q04121 GUT2YIL155C 1950 nt11.65□□□□□ -0.54
NHX1Q04121 FMP52YER004W 696 nt11.64□□□□□ -0.55
NHX1Q04121 FMT1YBL013W 1206 nt11.64□□□□□ -0.55
NHX1Q04121 FRD1YEL047C 1413 nt11.54□□□□□ -0.56
NHX1Q04121 SOR2YDL246C 1074 nt11.54□□□□□ -0.56
NHX1Q04121 SOR1YJR159W 1074 nt11.54□□□□□ -0.56
NHX1Q04121 CWP1YKL096W 720 nt11.54□□□□□ -0.56
NHX1Q04121 PCM1YEL058W 1674 nt11.53□□□□□ -0.56
NHX1Q04121 ADH2YMR303C 1047 nt11.53□□□□□ -0.56
NHX1Q04121 YCL042WYCL042W 360 nt11.53□□□□□ -0.56
NHX1Q04121 SPP1YPL138C 1062 nt11.49□□□□□ -0.57
NHX1Q04121 PIB2YGL023C 1908 nt11.48□□□□□ -0.57
NHX1Q04121 RTF1YGL244W 1677 nt11.46□□□□□ -0.57
NHX1Q04121 SNF6YHL025W 999 nt11.46□□□□□ -0.57
NHX1Q04121 BOP3YNL042W 1191 nt11.43□□□□□ -0.58
NHX1Q04121 LCB1YMR296C 1677 nt11.43□□□□□ -0.58
NHX1Q04121 NCP1YHR042W 2076 nt11.41□□□□□ -0.58
NHX1Q04121 SIM1YIL123W 1431 nt11.4□□□□□ -0.58
NHX1Q04121 BIO4YNR057C 714 nt11.35□□□□□ -0.59
NHX1Q04121 YIH1YCR059C 777 nt11.33□□□□□ -0.6
NHX1Q04121 PTH1YHR189W 573 nt11.31□□□□□ -0.6
NHX1Q04121 RNQ1YCL028W 1218 nt11.3□□□□□ -0.6
NHX1Q04121 DIC1YLR348C 897 nt11.29□□□□□ -0.6
NHX1Q04121 PTK1YKL198C 1989 nt11.28□□□□□ -0.6
NHX1Q04121 PAC11YDR488C 1602 nt11.28□□□□□ -0.6
NHX1Q04121 YLR235CYLR235C 399 nt11.26□□□□□ -0.61
NHX1Q04121 YLL053CYLL053C 459 nt11.25□□□□□ -0.61
NHX1Q04121 RTG1YOL067C 534 nt11.2□□□□□ -0.62
NHX1Q04121 LYS4YDR234W 2082 nt11.18□□□□□ -0.62
NHX1Q04121 YKL030WYKL030W 606 nt11.17□□□□□ -0.62
NHX1Q04121 ERF2YLR246W 1080 nt11.17□□□□□ -0.62
NHX1Q04121 FTR1YER145C 1215 nt11.16□□□□□ -0.62
NHX1Q04121 TIM23YNR017W 669 nt11.16□□□□□ -0.62
NHX1Q04121 CRR1YLR213C 1269 nt11.15□□□□□ -0.62
NHX1Q04121 GAL1YBR020W 1587 nt11.13□□□□□ -0.63
NHX1Q04121 NVJ2YPR091C 2313 nt11.13□□□□□ -0.63
NHX1Q04121 YLR179CYLR179C 606 nt11.12□□□□□ -0.63
NHX1Q04121 ATF2YGR177C 1608 nt11.12□□□□□ -0.63
NHX1Q04121 YEL076C-AYEL076C-A 651 nt11.11□□□□□ -0.63
NHX1Q04121 YEL076CYEL076C 651 nt11.11□□□□□ -0.63
NHX1Q04121 YLR464WYLR464W 651 nt11.11□□□□□ -0.63
NHX1Q04121 TRM5YHR070W 1500 nt11.1□□□□□ -0.63
NHX1Q04121 YFL054CYFL054C 1941 nt11.1□□□□□ -0.63
NHX1Q04121 MRPL8YJL063C 717 nt11.09□□□□□ -0.63
NHX1Q04121 YFL067WYFL067W 528 nt11.07□□□□□ -0.64
NHX1Q04121 AQY1YPR192W 918 nt11.06□□□□□ -0.64
NHX1Q04121 DDR2YOL052C-A 186 nt11.04□□□□□ -0.64
NHX1Q04121 HEM12YDR047W 1089 nt11.03□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 11.6 ms