Protein–RNA interactions for Protein: Q03834

MSH6, DNA mismatch repair protein MSH6, yeastyeast

Predictions only

Length 1,242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH6Q03834 NVJ2YPR091C 2313 nt12.8□□□□□ -0.36
MSH6Q03834 YOL037CYOL037C 354 nt12.79□□□□□ -0.36
MSH6Q03834 FPS1YLL043W 2010 nt12.76□□□□□ -0.37
MSH6Q03834 SIS1YNL007C 1059 nt12.76□□□□□ -0.37
MSH6Q03834 PTP1YDL230W 1008 nt12.73□□□□□ -0.37
MSH6Q03834 YDL221WYDL221W 552 nt12.72□□□□□ -0.37
MSH6Q03834 CAC2YML102W 1407 nt12.69□□□□□ -0.38
MSH6Q03834 TAT1YBR069C 1860 nt12.68□□□□□ -0.38
MSH6Q03834 YBR220CYBR220C 1683 nt12.62□□□□□ -0.39
MSH6Q03834 SDH1YKL148C 1923 nt12.59□□□□□ -0.39
MSH6Q03834 ART5YGR068C 1761 nt12.57□□□□□ -0.4
MSH6Q03834 PET9YBL030C 957 nt12.54□□□□□ -0.4
MSH6Q03834 GFD2YCL036W 1701 nt12.54□□□□□ -0.4
MSH6Q03834 YCH1YGR203W 447 nt12.53□□□□□ -0.4
MSH6Q03834 SCC4YER147C 1875 nt12.51□□□□□ -0.41
MSH6Q03834 tM(CAU)CtM(CAU)C 72 nt12.5□□□□□ -0.41
MSH6Q03834 IMT4tM(CAU)E 72 nt12.5□□□□□ -0.41
MSH6Q03834 IMT3tM(CAU)J3 72 nt12.5□□□□□ -0.41
MSH6Q03834 IMT1tM(CAU)O1 72 nt12.5□□□□□ -0.41
MSH6Q03834 IMT2tM(CAU)P 72 nt12.5□□□□□ -0.41
MSH6Q03834 YLR281CYLR281C 468 nt12.5□□□□□ -0.41
MSH6Q03834 IRC15YPL017C 1500 nt12.5□□□□□ -0.41
MSH6Q03834 RTS2YOR077W 699 nt12.46□□□□□ -0.41
MSH6Q03834 YLR154C-GYLR154C-G 150 nt12.45□□□□□ -0.42
MSH6Q03834 WHI5YOR083W 888 nt12.45□□□□□ -0.42
MSH6Q03834 GIS3YLR094C 1509 nt12.45□□□□□ -0.42
MSH6Q03834 TIR4YOR009W 1464 nt12.44□□□□□ -0.42
MSH6Q03834 YJL152WYJL152W 360 nt12.41□□□□□ -0.42
MSH6Q03834 YMR057CYMR057C 372 nt12.37□□□□□ -0.43
MSH6Q03834 PUS2YGL063W 1113 nt12.36□□□□□ -0.43
MSH6Q03834 CUE1YMR264W 612 nt12.35□□□□□ -0.43
MSH6Q03834 SEC11YIR022W 504 nt12.31□□□□□ -0.44
MSH6Q03834 YIL100WYIL100W 354 nt12.3□□□□□ -0.44
MSH6Q03834 YCL048W-AYCL048W-A 240 nt12.29□□□□□ -0.44
MSH6Q03834 YNL195CYNL195C 786 nt12.26□□□□□ -0.45
MSH6Q03834 YLR236CYLR236C 324 nt12.25□□□□□ -0.45
MSH6Q03834 YPR011CYPR011C 981 nt12.24□□□□□ -0.45
MSH6Q03834 IMP2'YIL154C 1041 nt12.22□□□□□ -0.45
MSH6Q03834 YSC84YHR016C 1407 nt12.21□□□□□ -0.45
MSH6Q03834 PCH2YBR186W 1695 nt12.21□□□□□ -0.45
MSH6Q03834 DSK2YMR276W 1122 nt12.19□□□□□ -0.46
MSH6Q03834 IDH1YNL037C 1083 nt12.16□□□□□ -0.46
MSH6Q03834 GUT2YIL155C 1950 nt12.11□□□□□ -0.47
MSH6Q03834 RRT12YCR045C 1476 nt12.08□□□□□ -0.47
MSH6Q03834 NME1NME1 340 nt12.08□□□□□ -0.48
MSH6Q03834 YHL050CYHL050C 2094 nt12.07□□□□□ -0.48
MSH6Q03834 FMP45YDL222C 930 nt12.05□□□□□ -0.48
MSH6Q03834 GBP2YCL011C 1284 nt12.05□□□□□ -0.48
MSH6Q03834 YDR433WYDR433W 441 nt11.98□□□□□ -0.49
MSH6Q03834 ERV46YAL042W 1248 nt11.97□□□□□ -0.49
MSH6Q03834 LPX1YOR084W 1164 nt11.97□□□□□ -0.49
MSH6Q03834 RTF1YGL244W 1677 nt11.94□□□□□ -0.5
MSH6Q03834 TCD2YKL027W 1344 nt11.93□□□□□ -0.5
MSH6Q03834 BOP3YNL042W 1191 nt11.93□□□□□ -0.5
MSH6Q03834 YGR139WYGR139W 339 nt11.89□□□□□ -0.51
MSH6Q03834 MXR2YCL033C 507 nt11.87□□□□□ -0.51
MSH6Q03834 FMP52YER004W 696 nt11.86□□□□□ -0.51
MSH6Q03834 RRD1YIL153W 1182 nt11.86□□□□□ -0.51
MSH6Q03834 DED1YOR204W 1815 nt11.86□□□□□ -0.51
MSH6Q03834 YKR040CYKR040C 504 nt11.85□□□□□ -0.51
MSH6Q03834 UME6YDR207C 2511 nt11.84□□□□□ -0.51
MSH6Q03834 PIB2YGL023C 1908 nt11.81□□□□□ -0.52
MSH6Q03834 SPP1YPL138C 1062 nt11.79□□□□□ -0.52
MSH6Q03834 YJL225CYJL225C 5277 nt11.78□□□□□ -0.52
MSH6Q03834 FMT1YBL013W 1206 nt11.74□□□□□ -0.53
MSH6Q03834 PCM1YEL058W 1674 nt11.72□□□□□ -0.53
MSH6Q03834 YCL042WYCL042W 360 nt11.72□□□□□ -0.53
MSH6Q03834 CWP1YKL096W 720 nt11.7□□□□□ -0.54
MSH6Q03834 SIM1YIL123W 1431 nt11.69□□□□□ -0.54
MSH6Q03834 SNF6YHL025W 999 nt11.69□□□□□ -0.54
MSH6Q03834 FRD1YEL047C 1413 nt11.69□□□□□ -0.54
MSH6Q03834 LCB1YMR296C 1677 nt11.67□□□□□ -0.54
MSH6Q03834 NCP1YHR042W 2076 nt11.66□□□□□ -0.54
MSH6Q03834 PTK1YKL198C 1989 nt11.65□□□□□ -0.54
MSH6Q03834 ADH2YMR303C 1047 nt11.65□□□□□ -0.54
MSH6Q03834 SOR2YDL246C 1074 nt11.64□□□□□ -0.55
MSH6Q03834 SOR1YJR159W 1074 nt11.64□□□□□ -0.55
MSH6Q03834 RTG1YOL067C 534 nt11.59□□□□□ -0.55
MSH6Q03834 YFL054CYFL054C 1941 nt11.56□□□□□ -0.56
MSH6Q03834 BIO4YNR057C 714 nt11.55□□□□□ -0.56
MSH6Q03834 MRPL8YJL063C 717 nt11.53□□□□□ -0.56
MSH6Q03834 YIH1YCR059C 777 nt11.47□□□□□ -0.57
MSH6Q03834 YEL076C-AYEL076C-A 651 nt11.47□□□□□ -0.57
MSH6Q03834 YEL076CYEL076C 651 nt11.47□□□□□ -0.57
MSH6Q03834 ERF2YLR246W 1080 nt11.47□□□□□ -0.57
MSH6Q03834 YLR464WYLR464W 651 nt11.47□□□□□ -0.57
MSH6Q03834 PTH1YHR189W 573 nt11.46□□□□□ -0.57
MSH6Q03834 RNQ1YCL028W 1218 nt11.46□□□□□ -0.57
MSH6Q03834 YLR235CYLR235C 399 nt11.45□□□□□ -0.58
MSH6Q03834 YLL053CYLL053C 459 nt11.42□□□□□ -0.58
MSH6Q03834 SPT8YLR055C 1809 nt11.41□□□□□ -0.58
MSH6Q03834 LYS4YDR234W 2082 nt11.39□□□□□ -0.59
MSH6Q03834 DIC1YLR348C 897 nt11.39□□□□□ -0.59
MSH6Q03834 BOR1YNL275W 1731 nt11.38□□□□□ -0.59
MSH6Q03834 CRR1YLR213C 1269 nt11.37□□□□□ -0.59
MSH6Q03834 YKL030WYKL030W 606 nt11.36□□□□□ -0.59
MSH6Q03834 ADO1YJR105W 1023 nt11.35□□□□□ -0.59
MSH6Q03834 YFL067WYFL067W 528 nt11.34□□□□□ -0.59
MSH6Q03834 FTR1YER145C 1215 nt11.32□□□□□ -0.6
MSH6Q03834 HEM12YDR047W 1089 nt11.31□□□□□ -0.6
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms