Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 YGR021WYGR021W 873 nt8.63□□□□□ -1.03
SMD1Q02260 CAC2YML102W 1407 nt8.63□□□□□ -1.03
SMD1Q02260 YFL021C-AYFL021C-A 855 nt8.62□□□□□ -1.03
SMD1Q02260 SCC4YER147C 1875 nt8.54□□□□□ -1.04
SMD1Q02260 SEC11YIR022W 504 nt8.54□□□□□ -1.04
SMD1Q02260 MOT3YMR070W 1473 nt8.52□□□□□ -1.05
SMD1Q02260 HOM6YJR139C 1080 nt8.52□□□□□ -1.05
SMD1Q02260 IRC15YPL017C 1500 nt8.51□□□□□ -1.05
SMD1Q02260 YCH1YGR203W 447 nt8.5□□□□□ -1.05
SMD1Q02260 SHU1YHL006C 453 nt8.5□□□□□ -1.05
SMD1Q02260 PET9YBL030C 957 nt8.49□□□□□ -1.05
SMD1Q02260 UME6YDR207C 2511 nt8.47□□□□□ -1.05
SMD1Q02260 PCH2YBR186W 1695 nt8.46□□□□□ -1.06
SMD1Q02260 GFD2YCL036W 1701 nt8.46□□□□□ -1.06
SMD1Q02260 ART5YGR068C 1761 nt8.45□□□□□ -1.06
SMD1Q02260 GIS3YLR094C 1509 nt8.45□□□□□ -1.06
SMD1Q02260 GUT2YIL155C 1950 nt8.41□□□□□ -1.06
SMD1Q02260 YAL037C-BYAL037C-B 975 nt8.4□□□□□ -1.06
SMD1Q02260 RKM5YLR137W 1104 nt8.39□□□□□ -1.07
SMD1Q02260 CUE1YMR264W 612 nt8.36□□□□□ -1.07
SMD1Q02260 MNP1YGL068W 585 nt8.33□□□□□ -1.08
SMD1Q02260 YKL097CYKL097C 411 nt8.32□□□□□ -1.08
SMD1Q02260 YSC84YHR016C 1407 nt8.31□□□□□ -1.08
SMD1Q02260 TIR4YOR009W 1464 nt8.3□□□□□ -1.08
SMD1Q02260 RTS2YOR077W 699 nt8.29□□□□□ -1.08
SMD1Q02260 YHL050CYHL050C 2094 nt8.29□□□□□ -1.08
SMD1Q02260 YNL195CYNL195C 786 nt8.28□□□□□ -1.08
SMD1Q02260 RPM1RPM1 483 nt8.27□□□□□ -1.09
SMD1Q02260 PIB2YGL023C 1908 nt8.27□□□□□ -1.09
SMD1Q02260 YIL100WYIL100W 354 nt8.26□□□□□ -1.09
SMD1Q02260 YMR057CYMR057C 372 nt8.26□□□□□ -1.09
SMD1Q02260 NPL3YDR432W 1245 nt8.24□□□□□ -1.09
SMD1Q02260 YLR236CYLR236C 324 nt8.24□□□□□ -1.09
SMD1Q02260 RTF1YGL244W 1677 nt8.23□□□□□ -1.09
SMD1Q02260 YLR154C-GYLR154C-G 150 nt8.22□□□□□ -1.09
SMD1Q02260 BOP3YNL042W 1191 nt8.22□□□□□ -1.09
SMD1Q02260 YOL037CYOL037C 354 nt8.22□□□□□ -1.09
SMD1Q02260 RRT12YCR045C 1476 nt8.2□□□□□ -1.1
SMD1Q02260 YJL152WYJL152W 360 nt8.14□□□□□ -1.11
SMD1Q02260 YCL048W-AYCL048W-A 240 nt8.14□□□□□ -1.11
SMD1Q02260 PTK1YKL198C 1989 nt8.1□□□□□ -1.11
SMD1Q02260 NCP1YHR042W 2076 nt8.1□□□□□ -1.11
SMD1Q02260 YLR281CYLR281C 468 nt8.03□□□□□ -1.12
SMD1Q02260 WHI5YOR083W 888 nt8.02□□□□□ -1.13
SMD1Q02260 FMP52YER004W 696 nt8.01□□□□□ -1.13
SMD1Q02260 IMP2'YIL154C 1041 nt8□□□□□ -1.13
SMD1Q02260 YOR139CYOR139C 393 nt8□□□□□ -1.13
SMD1Q02260 IDH1YNL037C 1083 nt7.98□□□□□ -1.13
SMD1Q02260 RRD1YIL153W 1182 nt7.94□□□□□ -1.14
SMD1Q02260 LCB1YMR296C 1677 nt7.94□□□□□ -1.14
SMD1Q02260 GBP2YCL011C 1284 nt7.92□□□□□ -1.14
SMD1Q02260 TCD2YKL027W 1344 nt7.91□□□□□ -1.14
SMD1Q02260 MCH5YOR306C 1566 nt7.91□□□□□ -1.14
SMD1Q02260 YFL054CYFL054C 1941 nt7.91□□□□□ -1.14
SMD1Q02260 SPT8YLR055C 1809 nt7.89□□□□□ -1.15
SMD1Q02260 PCM1YEL058W 1674 nt7.88□□□□□ -1.15
SMD1Q02260 DED1YOR204W 1815 nt7.87□□□□□ -1.15
SMD1Q02260 DSK2YMR276W 1122 nt7.84□□□□□ -1.15
SMD1Q02260 SIM1YIL123W 1431 nt7.84□□□□□ -1.15
SMD1Q02260 LYS4YDR234W 2082 nt7.83□□□□□ -1.16
SMD1Q02260 PUS2YGL063W 1113 nt7.81□□□□□ -1.16
SMD1Q02260 FMT1YBL013W 1206 nt7.81□□□□□ -1.16
SMD1Q02260 BOR1YNL275W 1731 nt7.8□□□□□ -1.16
SMD1Q02260 SOR2YDL246C 1074 nt7.79□□□□□ -1.16
SMD1Q02260 SNF6YHL025W 999 nt7.79□□□□□ -1.16
SMD1Q02260 SOR1YJR159W 1074 nt7.79□□□□□ -1.16
SMD1Q02260 BIO4YNR057C 714 nt7.77□□□□□ -1.17
SMD1Q02260 tM(CAU)CtM(CAU)C 72 nt7.76□□□□□ -1.17
SMD1Q02260 IMT4tM(CAU)E 72 nt7.76□□□□□ -1.17
SMD1Q02260 IMT3tM(CAU)J3 72 nt7.76□□□□□ -1.17
SMD1Q02260 IMT1tM(CAU)O1 72 nt7.76□□□□□ -1.17
SMD1Q02260 IMT2tM(CAU)P 72 nt7.76□□□□□ -1.17
SMD1Q02260 ERF2YLR246W 1080 nt7.76□□□□□ -1.17
SMD1Q02260 ADH2YMR303C 1047 nt7.76□□□□□ -1.17
SMD1Q02260 FMP45YDL222C 930 nt7.75□□□□□ -1.17
SMD1Q02260 CWP1YKL096W 720 nt7.75□□□□□ -1.17
SMD1Q02260 YIH1YCR059C 777 nt7.74□□□□□ -1.17
SMD1Q02260 YDR433WYDR433W 441 nt7.74□□□□□ -1.17
SMD1Q02260 ERV46YAL042W 1248 nt7.74□□□□□ -1.17
SMD1Q02260 YCL042WYCL042W 360 nt7.74□□□□□ -1.17
SMD1Q02260 SWE1YJL187C 2460 nt7.73□□□□□ -1.17
SMD1Q02260 YKR040CYKR040C 504 nt7.72□□□□□ -1.17
SMD1Q02260 RNQ1YCL028W 1218 nt7.71□□□□□ -1.18
SMD1Q02260 CRR1YLR213C 1269 nt7.69□□□□□ -1.18
SMD1Q02260 YPR011CYPR011C 981 nt7.67□□□□□ -1.18
SMD1Q02260 MXR2YCL033C 507 nt7.66□□□□□ -1.18
SMD1Q02260 SSN3YPL042C 1668 nt7.66□□□□□ -1.18
SMD1Q02260 FRD1YEL047C 1413 nt7.65□□□□□ -1.18
SMD1Q02260 YFL067WYFL067W 528 nt7.65□□□□□ -1.18
SMD1Q02260 YLL053CYLL053C 459 nt7.64□□□□□ -1.19
SMD1Q02260 HEM12YDR047W 1089 nt7.62□□□□□ -1.19
SMD1Q02260 YHR056W-AYHR056W-A 435 nt7.62□□□□□ -1.19
SMD1Q02260 LPX1YOR084W 1164 nt7.61□□□□□ -1.19
SMD1Q02260 FTR1YER145C 1215 nt7.6□□□□□ -1.19
SMD1Q02260 FRE6YLL051C 2139 nt7.6□□□□□ -1.19
SMD1Q02260 RAX1YOR301W 1308 nt7.59□□□□□ -1.19
SMD1Q02260 HSP60YLR259C 1719 nt7.59□□□□□ -1.19
SMD1Q02260 ATF2YGR177C 1608 nt7.59□□□□□ -1.19
SMD1Q02260 AQY1YPR192W 918 nt7.58□□□□□ -1.2
SMD1Q02260 SNG1YGR197C 1644 nt7.56□□□□□ -1.2
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms