Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cacna1aP97445 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Cacna1aP97445 Zfp131-205ENSMUST00000223812 663 ntBASIC26.33■■□□□ 1.81
Cacna1aP97445 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cacna1aP97445 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.32■■□□□ 1.8
Cacna1aP97445 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Cacna1aP97445 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cacna1aP97445 Gm27322-201ENSMUST00000184007 104 ntBASIC26.23■■□□□ 1.79
Cacna1aP97445 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Cacna1aP97445 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cacna1aP97445 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Cacna1aP97445 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cacna1aP97445 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Cacna1aP97445 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Cacna1aP97445 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Cacna1aP97445 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Cacna1aP97445 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Cacna1aP97445 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.99■■□□□ 1.75
Cacna1aP97445 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Cacna1aP97445 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Cacna1aP97445 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Cacna1aP97445 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.95■■□□□ 1.74
Cacna1aP97445 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Cacna1aP97445 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Cacna1aP97445 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.92■■□□□ 1.74
Cacna1aP97445 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.91■■□□□ 1.74
Cacna1aP97445 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cacna1aP97445 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cacna1aP97445 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.78■■□□□ 1.72
Cacna1aP97445 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cacna1aP97445 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.77■■□□□ 1.72
Cacna1aP97445 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Cacna1aP97445 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Cacna1aP97445 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Cacna1aP97445 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.75■■□□□ 1.71
Cacna1aP97445 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Cacna1aP97445 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Cacna1aP97445 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.71■■□□□ 1.71
Cacna1aP97445 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.7■■□□□ 1.7
Cacna1aP97445 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.69■■□□□ 1.7
Cacna1aP97445 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cacna1aP97445 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Cacna1aP97445 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Cacna1aP97445 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Cacna1aP97445 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cacna1aP97445 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Cacna1aP97445 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.56■■□□□ 1.68
Cacna1aP97445 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cacna1aP97445 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cacna1aP97445 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Cacna1aP97445 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Cacna1aP97445 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.52■■□□□ 1.68
Cacna1aP97445 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Cacna1aP97445 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.51■■□□□ 1.67
Cacna1aP97445 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cacna1aP97445 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Cacna1aP97445 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Cacna1aP97445 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Cacna1aP97445 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cacna1aP97445 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Cacna1aP97445 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cacna1aP97445 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Cacna1aP97445 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cacna1aP97445 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Cacna1aP97445 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.38■■□□□ 1.65
Cacna1aP97445 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Cacna1aP97445 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cacna1aP97445 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.34■■□□□ 1.65
Cacna1aP97445 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Cacna1aP97445 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cacna1aP97445 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.32■■□□□ 1.64
Cacna1aP97445 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cacna1aP97445 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.25■■□□□ 1.63
Cacna1aP97445 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Cacna1aP97445 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.18■■□□□ 1.62
Cacna1aP97445 Gm16148-201ENSMUST00000119653 893 ntBASIC25.17■■□□□ 1.62
Cacna1aP97445 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Cacna1aP97445 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cacna1aP97445 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
Cacna1aP97445 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cacna1aP97445 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cacna1aP97445 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Cacna1aP97445 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Cacna1aP97445 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cacna1aP97445 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Cacna1aP97445 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.08■■□□□ 1.61
Cacna1aP97445 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.6
Cacna1aP97445 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cacna1aP97445 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cacna1aP97445 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cacna1aP97445 Peli2-204ENSMUST00000226513 1320 ntBASIC25.03■■□□□ 1.6
Cacna1aP97445 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.03■■□□□ 1.6
Cacna1aP97445 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Cacna1aP97445 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Cacna1aP97445 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Cacna1aP97445 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cacna1aP97445 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Cacna1aP97445 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.97■■□□□ 1.59
Cacna1aP97445 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cacna1aP97445 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms