Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.82■■■□□ 2.84
Irf5P56477 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.77■■■□□ 2.84
Irf5P56477 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
Irf5P56477 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.75■■■□□ 2.83
Irf5P56477 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Irf5P56477 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Irf5P56477 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.65■■■□□ 2.82
Irf5P56477 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.6■■■□□ 2.81
Irf5P56477 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.59■■■□□ 2.81
Irf5P56477 Gm24804-201ENSMUST00000174982 85 ntBASIC32.57■■■□□ 2.8
Irf5P56477 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.55■■■□□ 2.8
Irf5P56477 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Irf5P56477 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Irf5P56477 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Irf5P56477 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.53■■■□□ 2.8
Irf5P56477 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Irf5P56477 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Irf5P56477 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Irf5P56477 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
Irf5P56477 Gm27322-201ENSMUST00000184007 104 ntBASIC32.41■■■□□ 2.78
Irf5P56477 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Irf5P56477 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.34■■■□□ 2.77
Irf5P56477 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Irf5P56477 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Irf5P56477 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
Irf5P56477 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.26■■■□□ 2.75
Irf5P56477 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.75
Irf5P56477 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.26■■■□□ 2.75
Irf5P56477 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.25■■■□□ 2.75
Irf5P56477 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Irf5P56477 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Irf5P56477 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Irf5P56477 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Irf5P56477 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC32.11■■■□□ 2.73
Irf5P56477 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Irf5P56477 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Irf5P56477 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.02■■■□□ 2.72
Irf5P56477 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Irf5P56477 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
Irf5P56477 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Irf5P56477 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Irf5P56477 Zfp131-205ENSMUST00000223812 663 ntBASIC31.91■■■□□ 2.7
Irf5P56477 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Irf5P56477 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.88■■■□□ 2.69
Irf5P56477 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Irf5P56477 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
Irf5P56477 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Irf5P56477 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Irf5P56477 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Irf5P56477 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Irf5P56477 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.72■■■□□ 2.67
Irf5P56477 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Irf5P56477 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Irf5P56477 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.69■■■□□ 2.66
Irf5P56477 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Irf5P56477 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.63■■■□□ 2.65
Irf5P56477 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Irf5P56477 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Irf5P56477 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Irf5P56477 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.58■■■□□ 2.65
Irf5P56477 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Irf5P56477 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Irf5P56477 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Irf5P56477 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.53■■■□□ 2.64
Irf5P56477 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Irf5P56477 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.5■■■□□ 2.63
Irf5P56477 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Irf5P56477 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.48■■■□□ 2.63
Irf5P56477 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Irf5P56477 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Irf5P56477 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.43■■■□□ 2.62
Irf5P56477 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Irf5P56477 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Irf5P56477 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Irf5P56477 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Irf5P56477 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Irf5P56477 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Irf5P56477 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.33■■■□□ 2.61
Irf5P56477 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.33■■■□□ 2.61
Irf5P56477 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
Irf5P56477 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Irf5P56477 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Irf5P56477 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Irf5P56477 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Irf5P56477 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Irf5P56477 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Irf5P56477 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
Irf5P56477 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Irf5P56477 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Irf5P56477 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
Irf5P56477 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
Irf5P56477 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Irf5P56477 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Irf5P56477 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Irf5P56477 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Irf5P56477 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Irf5P56477 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
Irf5P56477 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.11■■■□□ 2.57
Irf5P56477 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Irf5P56477 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms