Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 WHI5YOR083W 888 nt12.59□□□□□ -0.39
VPS9P54787 EMI2YDR516C 1503 nt12.52□□□□□ -0.4
VPS9P54787 tM(CAU)CtM(CAU)C 72 nt12.52□□□□□ -0.41
VPS9P54787 IMT4tM(CAU)E 72 nt12.52□□□□□ -0.41
VPS9P54787 IMT3tM(CAU)J3 72 nt12.52□□□□□ -0.41
VPS9P54787 IMT1tM(CAU)O1 72 nt12.52□□□□□ -0.41
VPS9P54787 IMT2tM(CAU)P 72 nt12.52□□□□□ -0.41
VPS9P54787 CAC2YML102W 1407 nt12.52□□□□□ -0.41
VPS9P54787 YJL152WYJL152W 360 nt12.51□□□□□ -0.41
VPS9P54787 ART5YGR068C 1761 nt12.5□□□□□ -0.41
VPS9P54787 TIR4YOR009W 1464 nt12.49□□□□□ -0.41
VPS9P54787 PUS2YGL063W 1113 nt12.49□□□□□ -0.41
VPS9P54787 YCH1YGR203W 447 nt12.47□□□□□ -0.41
VPS9P54787 YMR090WYMR090W 684 nt12.47□□□□□ -0.41
VPS9P54787 GFD2YCL036W 1701 nt12.45□□□□□ -0.42
VPS9P54787 PET9YBL030C 957 nt12.45□□□□□ -0.42
VPS9P54787 YDL221WYDL221W 552 nt12.43□□□□□ -0.42
VPS9P54787 YMR057CYMR057C 372 nt12.36□□□□□ -0.43
VPS9P54787 BDF1YLR399C 2061 nt12.36□□□□□ -0.43
VPS9P54787 IMP2'YIL154C 1041 nt12.34□□□□□ -0.43
VPS9P54787 DSK2YMR276W 1122 nt12.34□□□□□ -0.43
VPS9P54787 RTS2YOR077W 699 nt12.33□□□□□ -0.44
VPS9P54787 IRC15YPL017C 1500 nt12.32□□□□□ -0.44
VPS9P54787 IDH1YNL037C 1083 nt12.28□□□□□ -0.44
VPS9P54787 YJL225CYJL225C 5277 nt12.27□□□□□ -0.44
VPS9P54787 YCL048W-AYCL048W-A 240 nt12.27□□□□□ -0.45
VPS9P54787 SDH1YKL148C 1923 nt12.27□□□□□ -0.45
VPS9P54787 YBR220CYBR220C 1683 nt12.26□□□□□ -0.45
VPS9P54787 YLR236CYLR236C 324 nt12.25□□□□□ -0.45
VPS9P54787 GIS3YLR094C 1509 nt12.24□□□□□ -0.45
VPS9P54787 CUE1YMR264W 612 nt12.21□□□□□ -0.45
VPS9P54787 SCC4YER147C 1875 nt12.21□□□□□ -0.46
VPS9P54787 RDN37-1RDN37-1 5354 nt12.2□□□□□ -0.46
VPS9P54787 RDN37-2RDN37-2 5354 nt12.2□□□□□ -0.46
VPS9P54787 YPR011CYPR011C 981 nt12.2□□□□□ -0.46
VPS9P54787 FPS1YLL043W 2010 nt12.18□□□□□ -0.46
VPS9P54787 FMP45YDL222C 930 nt12.18□□□□□ -0.46
VPS9P54787 TAT1YBR069C 1860 nt12.18□□□□□ -0.46
VPS9P54787 GBP2YCL011C 1284 nt12.17□□□□□ -0.46
VPS9P54787 YDR433WYDR433W 441 nt12.1□□□□□ -0.47
VPS9P54787 YIL100WYIL100W 354 nt12.1□□□□□ -0.47
VPS9P54787 MOT3YMR070W 1473 nt12.08□□□□□ -0.47
VPS9P54787 ERV46YAL042W 1248 nt12.06□□□□□ -0.48
VPS9P54787 LPX1YOR084W 1164 nt12.05□□□□□ -0.48
VPS9P54787 TCD2YKL027W 1344 nt12.05□□□□□ -0.48
VPS9P54787 MXR2YCL033C 507 nt11.99□□□□□ -0.49
VPS9P54787 RRD1YIL153W 1182 nt11.98□□□□□ -0.49
VPS9P54787 YKR040CYKR040C 504 nt11.98□□□□□ -0.49
VPS9P54787 YNL195CYNL195C 786 nt11.95□□□□□ -0.5
VPS9P54787 DED1YOR204W 1815 nt11.94□□□□□ -0.5
VPS9P54787 YSC84YHR016C 1407 nt11.9□□□□□ -0.5
VPS9P54787 FMP52YER004W 696 nt11.87□□□□□ -0.51
VPS9P54787 RRT12YCR045C 1476 nt11.85□□□□□ -0.51
VPS9P54787 SEC11YIR022W 504 nt11.85□□□□□ -0.51
VPS9P54787 FMT1YBL013W 1206 nt11.83□□□□□ -0.52
VPS9P54787 YCL042WYCL042W 360 nt11.82□□□□□ -0.52
VPS9P54787 YHL050CYHL050C 2094 nt11.81□□□□□ -0.52
VPS9P54787 SPP1YPL138C 1062 nt11.79□□□□□ -0.52
VPS9P54787 SOR2YDL246C 1074 nt11.78□□□□□ -0.52
VPS9P54787 SOR1YJR159W 1074 nt11.78□□□□□ -0.52
VPS9P54787 FRD1YEL047C 1413 nt11.77□□□□□ -0.52
VPS9P54787 CWP1YKL096W 720 nt11.76□□□□□ -0.53
VPS9P54787 PCH2YBR186W 1695 nt11.75□□□□□ -0.53
VPS9P54787 ADH2YMR303C 1047 nt11.72□□□□□ -0.53
VPS9P54787 PCM1YEL058W 1674 nt11.71□□□□□ -0.53
VPS9P54787 GUT2YIL155C 1950 nt11.71□□□□□ -0.53
VPS9P54787 SNF6YHL025W 999 nt11.67□□□□□ -0.54
VPS9P54787 PTH1YHR189W 573 nt11.59□□□□□ -0.55
VPS9P54787 PIB2YGL023C 1908 nt11.58□□□□□ -0.55
VPS9P54787 YLR235CYLR235C 399 nt11.57□□□□□ -0.56
VPS9P54787 SIM1YIL123W 1431 nt11.56□□□□□ -0.56
VPS9P54787 MRPL8YJL063C 717 nt11.54□□□□□ -0.56
VPS9P54787 RTG1YOL067C 534 nt11.54□□□□□ -0.56
VPS9P54787 LCB1YMR296C 1677 nt11.53□□□□□ -0.56
VPS9P54787 YIH1YCR059C 777 nt11.53□□□□□ -0.56
VPS9P54787 DIC1YLR348C 897 nt11.52□□□□□ -0.57
VPS9P54787 BOP3YNL042W 1191 nt11.52□□□□□ -0.57
VPS9P54787 BIO4YNR057C 714 nt11.52□□□□□ -0.57
VPS9P54787 RNQ1YCL028W 1218 nt11.52□□□□□ -0.57
VPS9P54787 RTF1YGL244W 1677 nt11.52□□□□□ -0.57
VPS9P54787 YEL076C-AYEL076C-A 651 nt11.49□□□□□ -0.57
VPS9P54787 YEL076CYEL076C 651 nt11.49□□□□□ -0.57
VPS9P54787 YLR464WYLR464W 651 nt11.49□□□□□ -0.57
VPS9P54787 YKL030WYKL030W 606 nt11.48□□□□□ -0.57
VPS9P54787 ADO1YJR105W 1023 nt11.46□□□□□ -0.57
VPS9P54787 NCP1YHR042W 2076 nt11.46□□□□□ -0.57
VPS9P54787 TIM23YNR017W 669 nt11.44□□□□□ -0.58
VPS9P54787 YLL053CYLL053C 459 nt11.43□□□□□ -0.58
VPS9P54787 HUA1YGR268C 597 nt11.39□□□□□ -0.59
VPS9P54787 YLR179CYLR179C 606 nt11.38□□□□□ -0.59
VPS9P54787 PAC11YDR488C 1602 nt11.37□□□□□ -0.59
VPS9P54787 FTR1YER145C 1215 nt11.36□□□□□ -0.59
VPS9P54787 ERF2YLR246W 1080 nt11.36□□□□□ -0.59
VPS9P54787 PTK1YKL198C 1989 nt11.32□□□□□ -0.6
VPS9P54787 GAL1YBR020W 1587 nt11.32□□□□□ -0.6
VPS9P54787 AQY1YPR192W 918 nt11.31□□□□□ -0.6
VPS9P54787 CRR1YLR213C 1269 nt11.3□□□□□ -0.6
VPS9P54787 TRM5YHR070W 1500 nt11.3□□□□□ -0.6
VPS9P54787 YPR064WYPR064W 420 nt11.28□□□□□ -0.6
VPS9P54787 ATF2YGR177C 1608 nt11.27□□□□□ -0.6
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms