Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 YLR154C-GYLR154C-G 150 nt14.19□□□□□ -0.14
HDA1P53973 SIS1YNL007C 1059 nt14.19□□□□□ -0.14
HDA1P53973 YPR011CYPR011C 981 nt14.18□□□□□ -0.14
HDA1P53973 PTP1YDL230W 1008 nt14.17□□□□□ -0.14
HDA1P53973 DCW1YKL046C 1350 nt14.12□□□□□ -0.15
HDA1P53973 YLR236CYLR236C 324 nt14.09□□□□□ -0.15
HDA1P53973 RPP2AYOL039W 321 nt14.09□□□□□ -0.15
HDA1P53973 TIR4YOR009W 1464 nt14.09□□□□□ -0.15
HDA1P53973 YCH1YGR203W 447 nt14.07□□□□□ -0.16
HDA1P53973 CAC2YML102W 1407 nt14.05□□□□□ -0.16
HDA1P53973 ART5YGR068C 1761 nt14.04□□□□□ -0.16
HDA1P53973 YJL152WYJL152W 360 nt14.03□□□□□ -0.16
HDA1P53973 DSK2YMR276W 1122 nt13.98□□□□□ -0.17
HDA1P53973 GFD2YCL036W 1701 nt13.95□□□□□ -0.18
HDA1P53973 FMP45YDL222C 930 nt13.9□□□□□ -0.18
HDA1P53973 YMR057CYMR057C 372 nt13.9□□□□□ -0.18
HDA1P53973 MOT3YMR070W 1473 nt13.87□□□□□ -0.19
HDA1P53973 EMI2YDR516C 1503 nt13.86□□□□□ -0.19
HDA1P53973 PET9YBL030C 957 nt13.86□□□□□ -0.19
HDA1P53973 SSA4YER103W 1929 nt13.84□□□□□ -0.19
HDA1P53973 IRC15YPL017C 1500 nt13.82□□□□□ -0.2
HDA1P53973 IMP2'YIL154C 1041 nt13.82□□□□□ -0.2
HDA1P53973 LPX1YOR084W 1164 nt13.82□□□□□ -0.2
HDA1P53973 RTS2YOR077W 699 nt13.8□□□□□ -0.2
HDA1P53973 YDL221WYDL221W 552 nt13.76□□□□□ -0.21
HDA1P53973 IDH1YNL037C 1083 nt13.76□□□□□ -0.21
HDA1P53973 FPS1YLL043W 2010 nt13.73□□□□□ -0.21
HDA1P53973 ERV46YAL042W 1248 nt13.71□□□□□ -0.21
HDA1P53973 MXR2YCL033C 507 nt13.71□□□□□ -0.21
HDA1P53973 GBP2YCL011C 1284 nt13.7□□□□□ -0.22
HDA1P53973 GIS3YLR094C 1509 nt13.69□□□□□ -0.22
HDA1P53973 YDR433WYDR433W 441 nt13.68□□□□□ -0.22
HDA1P53973 SPP1YPL138C 1062 nt13.68□□□□□ -0.22
HDA1P53973 YCL048W-AYCL048W-A 240 nt13.65□□□□□ -0.22
HDA1P53973 DED1YOR204W 1815 nt13.6□□□□□ -0.23
HDA1P53973 YBR220CYBR220C 1683 nt13.59□□□□□ -0.23
HDA1P53973 RRD1YIL153W 1182 nt13.58□□□□□ -0.24
HDA1P53973 CUE1YMR264W 612 nt13.58□□□□□ -0.24
HDA1P53973 SDH1YKL148C 1923 nt13.58□□□□□ -0.24
HDA1P53973 YKR040CYKR040C 504 nt13.57□□□□□ -0.24
HDA1P53973 YMR090WYMR090W 684 nt13.57□□□□□ -0.24
HDA1P53973 SCC4YER147C 1875 nt13.52□□□□□ -0.25
HDA1P53973 TCD2YKL027W 1344 nt13.48□□□□□ -0.25
HDA1P53973 FMT1YBL013W 1206 nt13.48□□□□□ -0.25
HDA1P53973 FRD1YEL047C 1413 nt13.41□□□□□ -0.26
HDA1P53973 RTG1YOL067C 534 nt13.37□□□□□ -0.27
HDA1P53973 BDF1YLR399C 2061 nt13.35□□□□□ -0.27
HDA1P53973 YIL100WYIL100W 354 nt13.33□□□□□ -0.28
HDA1P53973 SOR2YDL246C 1074 nt13.27□□□□□ -0.29
HDA1P53973 SOR1YJR159W 1074 nt13.27□□□□□ -0.29
HDA1P53973 RRT12YCR045C 1476 nt13.26□□□□□ -0.29
HDA1P53973 ADH2YMR303C 1047 nt13.25□□□□□ -0.29
HDA1P53973 YEL076C-AYEL076C-A 651 nt13.23□□□□□ -0.29
HDA1P53973 YEL076CYEL076C 651 nt13.23□□□□□ -0.29
HDA1P53973 CWP1YKL096W 720 nt13.23□□□□□ -0.29
HDA1P53973 YLR464WYLR464W 651 nt13.23□□□□□ -0.29
HDA1P53973 PTH1YHR189W 573 nt13.22□□□□□ -0.29
HDA1P53973 MRPL8YJL063C 717 nt13.22□□□□□ -0.29
HDA1P53973 YHL050CYHL050C 2094 nt13.21□□□□□ -0.29
HDA1P53973 YCL042WYCL042W 360 nt13.2□□□□□ -0.3
HDA1P53973 YSC84YHR016C 1407 nt13.2□□□□□ -0.3
HDA1P53973 FMP52YER004W 696 nt13.19□□□□□ -0.3
HDA1P53973 PCM1YEL058W 1674 nt13.15□□□□□ -0.31
HDA1P53973 TAT1YBR069C 1860 nt13.14□□□□□ -0.31
HDA1P53973 ADO1YJR105W 1023 nt13.06□□□□□ -0.32
HDA1P53973 YNL195CYNL195C 786 nt13.06□□□□□ -0.32
HDA1P53973 SNF6YHL025W 999 nt13.03□□□□□ -0.32
HDA1P53973 LCB1YMR296C 1677 nt13.02□□□□□ -0.32
HDA1P53973 YKL030WYKL030W 606 nt13□□□□□ -0.33
HDA1P53973 YLR235CYLR235C 399 nt12.99□□□□□ -0.33
HDA1P53973 DIC1YLR348C 897 nt12.98□□□□□ -0.33
HDA1P53973 UBX6YJL048C 1191 nt12.95□□□□□ -0.34
HDA1P53973 YIH1YCR059C 777 nt12.94□□□□□ -0.34
HDA1P53973 HUA1YGR268C 597 nt12.94□□□□□ -0.34
HDA1P53973 PCH2YBR186W 1695 nt12.93□□□□□ -0.34
HDA1P53973 RNQ1YCL028W 1218 nt12.92□□□□□ -0.34
HDA1P53973 SEC11YIR022W 504 nt12.91□□□□□ -0.34
HDA1P53973 BIO4YNR057C 714 nt12.91□□□□□ -0.34
HDA1P53973 TIM23YNR017W 669 nt12.89□□□□□ -0.35
HDA1P53973 GUT2YIL155C 1950 nt12.89□□□□□ -0.35
HDA1P53973 SIM1YIL123W 1431 nt12.87□□□□□ -0.35
HDA1P53973 NCP1YHR042W 2076 nt12.86□□□□□ -0.35
HDA1P53973 Q0182Q0182 405 nt12.86□□□□□ -0.35
HDA1P53973 YLL053CYLL053C 459 nt12.85□□□□□ -0.35
HDA1P53973 PIB2YGL023C 1908 nt12.84□□□□□ -0.35
HDA1P53973 YLR179CYLR179C 606 nt12.82□□□□□ -0.36
HDA1P53973 WSC2YNL283C 1512 nt12.8□□□□□ -0.36
HDA1P53973 FTR1YER145C 1215 nt12.75□□□□□ -0.37
HDA1P53973 GAL1YBR020W 1587 nt12.73□□□□□ -0.37
HDA1P53973 YDR094WYDR094W 336 nt12.72□□□□□ -0.37
HDA1P53973 AHT1YHR093W 549 nt12.72□□□□□ -0.37
HDA1P53973 TRM5YHR070W 1500 nt12.71□□□□□ -0.38
HDA1P53973 ATF2YGR177C 1608 nt12.7□□□□□ -0.38
HDA1P53973 LYS4YDR234W 2082 nt12.69□□□□□ -0.38
HDA1P53973 RTF1YGL244W 1677 nt12.67□□□□□ -0.38
HDA1P53973 YPR064WYPR064W 420 nt12.66□□□□□ -0.38
HDA1P53973 tL(GAG)GtL(GAG)G 82 nt12.65□□□□□ -0.38
HDA1P53973 TAD3YLR316C 969 nt12.64□□□□□ -0.39
HDA1P53973 BOP3YNL042W 1191 nt12.62□□□□□ -0.39
HDA1P53973 PRE6YOL038W 765 nt12.61□□□□□ -0.39
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms