Protein–RNA interactions for Protein: P53947

YNL058C, Vacuolar membrane protein YNL058C, yeastyeast

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL058CP53947 YDL221WYDL221W 552 nt12.41□□□□□ -0.42
YNL058CP53947 RKM5YLR137W 1104 nt12.4□□□□□ -0.42
YNL058CP53947 TAT1YBR069C 1860 nt12.35□□□□□ -0.43
YNL058CP53947 YBR220CYBR220C 1683 nt12.32□□□□□ -0.44
YNL058CP53947 ART5YGR068C 1761 nt12.31□□□□□ -0.44
YNL058CP53947 SDH1YKL148C 1923 nt12.29□□□□□ -0.44
YNL058CP53947 GFD2YCL036W 1701 nt12.25□□□□□ -0.45
YNL058CP53947 RTS2YOR077W 699 nt12.25□□□□□ -0.45
YNL058CP53947 SCC4YER147C 1875 nt12.22□□□□□ -0.45
YNL058CP53947 IRC15YPL017C 1500 nt12.21□□□□□ -0.45
YNL058CP53947 PET9YBL030C 957 nt12.21□□□□□ -0.45
YNL058CP53947 YJL152WYJL152W 360 nt12.2□□□□□ -0.46
YNL058CP53947 YOL037CYOL037C 354 nt12.19□□□□□ -0.46
YNL058CP53947 PAC11YDR488C 1602 nt12.18□□□□□ -0.46
YNL058CP53947 TIR4YOR009W 1464 nt12.17□□□□□ -0.46
YNL058CP53947 YCH1YGR203W 447 nt12.17□□□□□ -0.46
YNL058CP53947 GIS3YLR094C 1509 nt12.16□□□□□ -0.46
YNL058CP53947 NPL3YDR432W 1245 nt12.15□□□□□ -0.46
YNL058CP53947 YMR057CYMR057C 372 nt12.12□□□□□ -0.47
YNL058CP53947 YLR154C-GYLR154C-G 150 nt12.09□□□□□ -0.47
YNL058CP53947 CUE1YMR264W 612 nt12.06□□□□□ -0.48
YNL058CP53947 YIL100WYIL100W 354 nt12.04□□□□□ -0.48
YNL058CP53947 YCL048W-AYCL048W-A 240 nt12.03□□□□□ -0.48
YNL058CP53947 YOR139CYOR139C 393 nt12.02□□□□□ -0.49
YNL058CP53947 YNL195CYNL195C 786 nt12□□□□□ -0.49
YNL058CP53947 SEC11YIR022W 504 nt11.98□□□□□ -0.49
YNL058CP53947 YSC84YHR016C 1407 nt11.96□□□□□ -0.49
YNL058CP53947 YLR236CYLR236C 324 nt11.96□□□□□ -0.49
YNL058CP53947 WHI5YOR083W 888 nt11.93□□□□□ -0.5
YNL058CP53947 PCH2YBR186W 1695 nt11.91□□□□□ -0.5
YNL058CP53947 YLR281CYLR281C 468 nt11.86□□□□□ -0.51
YNL058CP53947 MOT3YMR070W 1473 nt11.86□□□□□ -0.51
YNL058CP53947 RRT12YCR045C 1476 nt11.85□□□□□ -0.51
YNL058CP53947 IDH1YNL037C 1083 nt11.82□□□□□ -0.52
YNL058CP53947 GUT2YIL155C 1950 nt11.81□□□□□ -0.52
YNL058CP53947 YHL050CYHL050C 2094 nt11.79□□□□□ -0.52
YNL058CP53947 GBP2YCL011C 1284 nt11.76□□□□□ -0.53
YNL058CP53947 PUS2YGL063W 1113 nt11.74□□□□□ -0.53
YNL058CP53947 IMP2'YIL154C 1041 nt11.67□□□□□ -0.54
YNL058CP53947 TCD2YKL027W 1344 nt11.66□□□□□ -0.54
YNL058CP53947 DSK2YMR276W 1122 nt11.66□□□□□ -0.54
YNL058CP53947 RTF1YGL244W 1677 nt11.65□□□□□ -0.54
YNL058CP53947 YDR433WYDR433W 441 nt11.63□□□□□ -0.55
YNL058CP53947 BOP3YNL042W 1191 nt11.63□□□□□ -0.55
YNL058CP53947 tM(CAU)CtM(CAU)C 72 nt11.59□□□□□ -0.55
YNL058CP53947 IMT4tM(CAU)E 72 nt11.59□□□□□ -0.55
YNL058CP53947 IMT3tM(CAU)J3 72 nt11.59□□□□□ -0.55
YNL058CP53947 IMT1tM(CAU)O1 72 nt11.59□□□□□ -0.55
YNL058CP53947 IMT2tM(CAU)P 72 nt11.59□□□□□ -0.55
YNL058CP53947 RPM1RPM1 483 nt11.58□□□□□ -0.56
YNL058CP53947 RRD1YIL153W 1182 nt11.57□□□□□ -0.56
YNL058CP53947 PIB2YGL023C 1908 nt11.53□□□□□ -0.56
YNL058CP53947 FMP52YER004W 696 nt11.52□□□□□ -0.57
YNL058CP53947 MXR2YCL033C 507 nt11.5□□□□□ -0.57
YNL058CP53947 FMP45YDL222C 930 nt11.48□□□□□ -0.57
YNL058CP53947 CWP1YKL096W 720 nt11.48□□□□□ -0.57
YNL058CP53947 DED1YOR204W 1815 nt11.48□□□□□ -0.57
YNL058CP53947 YCL042WYCL042W 360 nt11.46□□□□□ -0.57
YNL058CP53947 PCM1YEL058W 1674 nt11.46□□□□□ -0.58
YNL058CP53947 SIM1YIL123W 1431 nt11.44□□□□□ -0.58
YNL058CP53947 SNF6YHL025W 999 nt11.44□□□□□ -0.58
YNL058CP53947 YPR011CYPR011C 981 nt11.44□□□□□ -0.58
YNL058CP53947 UME6YDR207C 2511 nt11.42□□□□□ -0.58
YNL058CP53947 LPX1YOR084W 1164 nt11.42□□□□□ -0.58
YNL058CP53947 LCB1YMR296C 1677 nt11.41□□□□□ -0.58
YNL058CP53947 FMT1YBL013W 1206 nt11.41□□□□□ -0.58
YNL058CP53947 ADH2YMR303C 1047 nt11.41□□□□□ -0.58
YNL058CP53947 ERV46YAL042W 1248 nt11.36□□□□□ -0.59
YNL058CP53947 YKR040CYKR040C 504 nt11.36□□□□□ -0.59
YNL058CP53947 PTK1YKL198C 1989 nt11.36□□□□□ -0.59
YNL058CP53947 NCP1YHR042W 2076 nt11.34□□□□□ -0.59
YNL058CP53947 YFL054CYFL054C 1941 nt11.33□□□□□ -0.6
YNL058CP53947 SOR2YDL246C 1074 nt11.3□□□□□ -0.6
YNL058CP53947 SOR1YJR159W 1074 nt11.3□□□□□ -0.6
YNL058CP53947 BIO4YNR057C 714 nt11.29□□□□□ -0.6
YNL058CP53947 FRD1YEL047C 1413 nt11.25□□□□□ -0.61
YNL058CP53947 ERF2YLR246W 1080 nt11.18□□□□□ -0.62
YNL058CP53947 YIH1YCR059C 777 nt11.17□□□□□ -0.62
YNL058CP53947 YLL053CYLL053C 459 nt11.16□□□□□ -0.62
YNL058CP53947 RNQ1YCL028W 1218 nt11.16□□□□□ -0.62
YNL058CP53947 YJL225CYJL225C 5277 nt11.14□□□□□ -0.63
YNL058CP53947 DIC1YLR348C 897 nt11.14□□□□□ -0.63
YNL058CP53947 SPT8YLR055C 1809 nt11.13□□□□□ -0.63
YNL058CP53947 PTH1YHR189W 573 nt11.11□□□□□ -0.63
YNL058CP53947 FRE6YLL051C 2139 nt11.09□□□□□ -0.63
YNL058CP53947 LYS4YDR234W 2082 nt11.09□□□□□ -0.63
YNL058CP53947 CRR1YLR213C 1269 nt11.09□□□□□ -0.63
YNL058CP53947 HEM12YDR047W 1089 nt11.07□□□□□ -0.64
YNL058CP53947 SPP1YPL138C 1062 nt11.06□□□□□ -0.64
YNL058CP53947 YFL067WYFL067W 528 nt11.05□□□□□ -0.64
YNL058CP53947 DDR2YOL052C-A 186 nt11.05□□□□□ -0.64
YNL058CP53947 FTR1YER145C 1215 nt11.04□□□□□ -0.64
YNL058CP53947 YLR235CYLR235C 399 nt11.03□□□□□ -0.64
YNL058CP53947 TRM5YHR070W 1500 nt11.03□□□□□ -0.64
YNL058CP53947 ATF2YGR177C 1608 nt11.02□□□□□ -0.65
YNL058CP53947 GAL1YBR020W 1587 nt11.01□□□□□ -0.65
YNL058CP53947 TIM23YNR017W 669 nt10.98□□□□□ -0.65
YNL058CP53947 MIC10YCL057C-A 294 nt10.98□□□□□ -0.65
YNL058CP53947 SWE1YJL187C 2460 nt10.97□□□□□ -0.65
YNL058CP53947 YLR179CYLR179C 606 nt10.97□□□□□ -0.65
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms