Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Psd-208ENSMUST00000224556 2034 ntBASIC31.48■■■□□ 2.63
SqleP52019 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SqleP52019 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SqleP52019 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.4■■■□□ 2.62
SqleP52019 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
SqleP52019 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.39■■■□□ 2.62
SqleP52019 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SqleP52019 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SqleP52019 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
SqleP52019 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SqleP52019 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.28■■■□□ 2.6
SqleP52019 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SqleP52019 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SqleP52019 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.2■■■□□ 2.59
SqleP52019 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
SqleP52019 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.18■■■□□ 2.58
SqleP52019 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
SqleP52019 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SqleP52019 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
SqleP52019 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SqleP52019 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SqleP52019 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SqleP52019 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SqleP52019 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SqleP52019 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31■■■□□ 2.55
SqleP52019 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
SqleP52019 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
SqleP52019 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SqleP52019 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SqleP52019 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
SqleP52019 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.86■■■□□ 2.53
SqleP52019 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SqleP52019 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.85■■■□□ 2.53
SqleP52019 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
SqleP52019 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SqleP52019 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
SqleP52019 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
SqleP52019 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SqleP52019 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.69■■■□□ 2.5
SqleP52019 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SqleP52019 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.65■■■□□ 2.5
SqleP52019 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SqleP52019 Gm16148-201ENSMUST00000119653 893 ntBASIC30.62■■■□□ 2.49
SqleP52019 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SqleP52019 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.59■■■□□ 2.49
SqleP52019 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SqleP52019 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
SqleP52019 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SqleP52019 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SqleP52019 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.46■■■□□ 2.47
SqleP52019 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
SqleP52019 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.45■■■□□ 2.46
SqleP52019 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
SqleP52019 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SqleP52019 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.38■■■□□ 2.45
SqleP52019 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.38■■■□□ 2.45
SqleP52019 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.36■■■□□ 2.45
SqleP52019 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SqleP52019 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
SqleP52019 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.34■■■□□ 2.45
SqleP52019 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
SqleP52019 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.33■■■□□ 2.45
SqleP52019 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
SqleP52019 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SqleP52019 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
SqleP52019 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SqleP52019 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SqleP52019 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.3■■■□□ 2.44
SqleP52019 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
SqleP52019 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.27■■■□□ 2.44
SqleP52019 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SqleP52019 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.23■■■□□ 2.43
SqleP52019 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
SqleP52019 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SqleP52019 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
SqleP52019 Gm45855-201ENSMUST00000212546 880 ntBASIC30.19■■■□□ 2.42
SqleP52019 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SqleP52019 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
SqleP52019 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SqleP52019 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.14■■■□□ 2.42
SqleP52019 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SqleP52019 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SqleP52019 Peli2-204ENSMUST00000226513 1320 ntBASIC30.08■■■□□ 2.41
SqleP52019 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
SqleP52019 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SqleP52019 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.08■■■□□ 2.41
SqleP52019 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
SqleP52019 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SqleP52019 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SqleP52019 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.03■■■□□ 2.4
SqleP52019 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SqleP52019 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SqleP52019 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
SqleP52019 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SqleP52019 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SqleP52019 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SqleP52019 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SqleP52019 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
SqleP52019 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SqleP52019 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.85■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms