Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 ART5YGR068C 1761 nt15.62■□□□□ 0.09
VPS27P40343 YDL221WYDL221W 552 nt15.62■□□□□ 0.09
VPS27P40343 GFD2YCL036W 1701 nt15.55■□□□□ 0.08
VPS27P40343 TIR4YOR009W 1464 nt15.52■□□□□ 0.08
VPS27P40343 YBR220CYBR220C 1683 nt15.52■□□□□ 0.08
VPS27P40343 IRC15YPL017C 1500 nt15.5■□□□□ 0.07
VPS27P40343 PET9YBL030C 957 nt15.48■□□□□ 0.07
VPS27P40343 SDH1YKL148C 1923 nt15.47■□□□□ 0.07
VPS27P40343 YLR154C-GYLR154C-G 150 nt15.47■□□□□ 0.07
VPS27P40343 RTS2YOR077W 699 nt15.46■□□□□ 0.07
VPS27P40343 YJL152WYJL152W 360 nt15.45■□□□□ 0.06
VPS27P40343 BDF1YLR399C 2061 nt15.45■□□□□ 0.06
VPS27P40343 YMR057CYMR057C 372 nt15.41■□□□□ 0.06
VPS27P40343 GIS3YLR094C 1509 nt15.41■□□□□ 0.06
VPS27P40343 YCH1YGR203W 447 nt15.4■□□□□ 0.06
VPS27P40343 WHI5YOR083W 888 nt15.37■□□□□ 0.05
VPS27P40343 SCC4YER147C 1875 nt15.37■□□□□ 0.05
VPS27P40343 YLR281CYLR281C 468 nt15.35■□□□□ 0.05
VPS27P40343 CUE1YMR264W 612 nt15.24■□□□□ 0.03
VPS27P40343 TAT1YBR069C 1860 nt15.24■□□□□ 0.03
VPS27P40343 FPS1YLL043W 2010 nt15.19■□□□□ 0.02
VPS27P40343 PUS2YGL063W 1113 nt15.18■□□□□ 0.02
VPS27P40343 YCL048W-AYCL048W-A 240 nt15.18■□□□□ 0.02
VPS27P40343 tM(CAU)CtM(CAU)C 72 nt15.15■□□□□ 0.02
VPS27P40343 IMT4tM(CAU)E 72 nt15.15■□□□□ 0.02
VPS27P40343 IMT3tM(CAU)J3 72 nt15.15■□□□□ 0.02
VPS27P40343 IMT1tM(CAU)O1 72 nt15.15■□□□□ 0.02
VPS27P40343 IMT2tM(CAU)P 72 nt15.15■□□□□ 0.02
VPS27P40343 YIL100WYIL100W 354 nt15.08■□□□□ 0
VPS27P40343 YLR236CYLR236C 324 nt15.05■□□□□ -0
VPS27P40343 YSC84YHR016C 1407 nt15.04■□□□□ -0
VPS27P40343 IDH1YNL037C 1083 nt15.04■□□□□ -0
VPS27P40343 DSK2YMR276W 1122 nt15.01□□□□□ -0.01
VPS27P40343 RRT12YCR045C 1476 nt14.99□□□□□ -0.01
VPS27P40343 GBP2YCL011C 1284 nt14.98□□□□□ -0.01
VPS27P40343 YPR011CYPR011C 981 nt14.97□□□□□ -0.01
VPS27P40343 IMP2'YIL154C 1041 nt14.95□□□□□ -0.02
VPS27P40343 SEC11YIR022W 504 nt14.94□□□□□ -0.02
VPS27P40343 YNL195CYNL195C 786 nt14.94□□□□□ -0.02
VPS27P40343 YHL050CYHL050C 2094 nt14.94□□□□□ -0.02
VPS27P40343 PCH2YBR186W 1695 nt14.92□□□□□ -0.02
VPS27P40343 YDR433WYDR433W 441 nt14.85□□□□□ -0.03
VPS27P40343 RRD1YIL153W 1182 nt14.85□□□□□ -0.03
VPS27P40343 GUT2YIL155C 1950 nt14.84□□□□□ -0.03
VPS27P40343 TCD2YKL027W 1344 nt14.83□□□□□ -0.04
VPS27P40343 FMP45YDL222C 930 nt14.8□□□□□ -0.04
VPS27P40343 DED1YOR204W 1815 nt14.79□□□□□ -0.04
VPS27P40343 MXR2YCL033C 507 nt14.79□□□□□ -0.04
VPS27P40343 LPX1YOR084W 1164 nt14.76□□□□□ -0.05
VPS27P40343 ERV46YAL042W 1248 nt14.69□□□□□ -0.06
VPS27P40343 FMT1YBL013W 1206 nt14.69□□□□□ -0.06
VPS27P40343 Q0182Q0182 405 nt14.67□□□□□ -0.06
VPS27P40343 FMP52YER004W 696 nt14.63□□□□□ -0.07
VPS27P40343 YKR040CYKR040C 504 nt14.63□□□□□ -0.07
VPS27P40343 PIB2YGL023C 1908 nt14.61□□□□□ -0.07
VPS27P40343 RTF1YGL244W 1677 nt14.59□□□□□ -0.07
VPS27P40343 CWP1YKL096W 720 nt14.59□□□□□ -0.07
VPS27P40343 PCM1YEL058W 1674 nt14.57□□□□□ -0.08
VPS27P40343 ADH2YMR303C 1047 nt14.56□□□□□ -0.08
VPS27P40343 BOP3YNL042W 1191 nt14.53□□□□□ -0.08
VPS27P40343 YCL042WYCL042W 360 nt14.53□□□□□ -0.08
VPS27P40343 FRD1YEL047C 1413 nt14.49□□□□□ -0.09
VPS27P40343 LCB1YMR296C 1677 nt14.49□□□□□ -0.09
VPS27P40343 SOR2YDL246C 1074 nt14.48□□□□□ -0.09
VPS27P40343 SOR1YJR159W 1074 nt14.48□□□□□ -0.09
VPS27P40343 NCP1YHR042W 2076 nt14.47□□□□□ -0.09
VPS27P40343 SNF6YHL025W 999 nt14.47□□□□□ -0.09
VPS27P40343 MOT3YMR070W 1473 nt14.44□□□□□ -0.1
VPS27P40343 SIM1YIL123W 1431 nt14.43□□□□□ -0.1
VPS27P40343 SPP1YPL138C 1062 nt14.42□□□□□ -0.1
VPS27P40343 PTK1YKL198C 1989 nt14.38□□□□□ -0.11
VPS27P40343 BIO4YNR057C 714 nt14.34□□□□□ -0.11
VPS27P40343 YIH1YCR059C 777 nt14.26□□□□□ -0.13
VPS27P40343 PTH1YHR189W 573 nt14.26□□□□□ -0.13
VPS27P40343 RNQ1YCL028W 1218 nt14.23□□□□□ -0.13
VPS27P40343 YLL053CYLL053C 459 nt14.21□□□□□ -0.13
VPS27P40343 DIC1YLR348C 897 nt14.2□□□□□ -0.14
VPS27P40343 LYS4YDR234W 2082 nt14.17□□□□□ -0.14
VPS27P40343 YFL054CYFL054C 1941 nt14.17□□□□□ -0.14
VPS27P40343 PAC11YDR488C 1602 nt14.12□□□□□ -0.15
VPS27P40343 YLR235CYLR235C 399 nt14.11□□□□□ -0.15
VPS27P40343 ERF2YLR246W 1080 nt14.11□□□□□ -0.15
VPS27P40343 FTR1YER145C 1215 nt14.07□□□□□ -0.16
VPS27P40343 ATF2YGR177C 1608 nt14.06□□□□□ -0.16
VPS27P40343 CRR1YLR213C 1269 nt14.06□□□□□ -0.16
VPS27P40343 TRM5YHR070W 1500 nt14.04□□□□□ -0.16
VPS27P40343 GAL1YBR020W 1587 nt14.04□□□□□ -0.16
VPS27P40343 TIM23YNR017W 669 nt14.03□□□□□ -0.16
VPS27P40343 YLR179CYLR179C 606 nt14□□□□□ -0.17
VPS27P40343 YKL030WYKL030W 606 nt13.99□□□□□ -0.17
VPS27P40343 SPT8YLR055C 1809 nt13.99□□□□□ -0.17
VPS27P40343 YFL067WYFL067W 528 nt13.97□□□□□ -0.17
VPS27P40343 MIC10YCL057C-A 294 nt13.97□□□□□ -0.17
VPS27P40343 DDR2YOL052C-A 186 nt13.96□□□□□ -0.17
VPS27P40343 RTG1YOL067C 534 nt13.96□□□□□ -0.17
VPS27P40343 HEM12YDR047W 1089 nt13.95□□□□□ -0.18
VPS27P40343 SNG1YGR197C 1644 nt13.93□□□□□ -0.18
VPS27P40343 AQY1YPR192W 918 nt13.89□□□□□ -0.19
VPS27P40343 YDL086C-AYDL086C-A 435 nt13.87□□□□□ -0.19
VPS27P40343 STB1YNL309W 1263 nt13.85□□□□□ -0.19
Retrieved 100 of 7,029 protein–RNA pairs in 48.8 ms